RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LRTOMTQ8WZ04 291 aa20.77■□□□□ 0.91
SSBP3-216ENST00000610401 JADE3Q92613 823 aa20.77■□□□□ 0.91
SSBP3-216ENST00000610401 RHOBTB2Q9BYZ6 727 aa20.77■□□□□ 0.91
SSBP3-216ENST00000610401 MKS1Q9NXB0 559 aa20.77■□□□□ 0.91
SSBP3-216ENST00000610401 COMMD3-BMI1R4GMX3 469 aa20.77■□□□□ 0.91
SSBP3-216ENST00000610401 ADM5C9JUS6 153 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 DFFAO00273 331 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 THRAP10827 490 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 CKMT2P17540 419 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 CNTFP26441 200 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 HARS2P49590 506 aaKnown RBP20.76■□□□□ 0.91
SSBP3-216ENST00000610401 TNFAIP2Q03169 654 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 SNAPC2Q13487 334 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 HNRNPDQ14103 355 aaKnown RBP20.76■□□□□ 0.91
SSBP3-216ENST00000610401 CPNE1Q99829 537 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 MTF2Q9Y483 593 aaPredicted RBP20.76■□□□□ 0.91
SSBP3-216ENST00000610401 RGSL1A5PLK6 1076 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 ALDH1A2O94788 518 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 TGFB3P10600 412 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 CYP2C8P10632 490 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 NR2C2P49116 596 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 RPL14P50914 215 aaKnown RBP20.76■□□□□ 0.91
SSBP3-216ENST00000610401 PCSK7Q16549 785 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 MAP3K21Q5TCX8 1036 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 FSTL5Q8N475 847 aaPredicted RBP20.76■□□□□ 0.91
SSBP3-216ENST00000610401 FAM81AQ8TBF8 368 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 LRRC40Q9H9A6 602 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 SORCS3Q9UPU3 1222 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 V9GYQ6 96 aa20.76■□□□□ 0.91
SSBP3-216ENST00000610401 FAM149AA5PLN7 773 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 KPNA7A9QM74 516 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 AURKAO14965 403 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 NCAM1P13591 858 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 UGT1A6P19224 532 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 BST2Q10589 180 aaKnown RBP20.75■□□□□ 0.91
SSBP3-216ENST00000610401 PDAP1Q13442 181 aaKnown RBP20.75■□□□□ 0.91
SSBP3-216ENST00000610401 PTK2BQ14289 1009 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 PAN2Q504Q3 1202 aaKnown RBP20.75■□□□□ 0.91
SSBP3-216ENST00000610401 MTX3Q5HYI7 312 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 LDB1Q86U70 411 aaPredicted RBP20.75■□□□□ 0.91
SSBP3-216ENST00000610401 RTKNQ9BST9 563 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 DCUN1D5Q9BTE7 237 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 TRPC7Q9HCX4 862 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 STK39Q9UEW8 545 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 GIMAP2Q9UG22 337 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 SLC2A6Q9UGQ3 507 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.75■□□□□ 0.91
SSBP3-216ENST00000610401 RECQL4O94761 1208 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 PTPN3P26045 913 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 MAGEA6P43360 314 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 LIMK2P53671 638 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 GRTP1Q5TC63 336 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 ARHGAP36Q6ZRI8 547 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 SIX6OS1Q8N1H7 587 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 RYBPQ8N488 228 aaPredicted RBP20.75■□□□□ 0.91
SSBP3-216ENST00000610401 SFMBT1Q9UHJ3 866 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 FZD10Q9ULW2 581 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 FER1L6Q2WGJ9 1857 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 I6L893 689 aaPredicted RBP20.75■□□□□ 0.91
SSBP3-216ENST00000610401 NRP1O14786 923 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 HDAC3O15379 428 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 PMPCBO75439 489 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 ZNF280AP59817 542 aaPredicted RBP20.75■□□□□ 0.91
SSBP3-216ENST00000610401 TPI1P60174 286 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 ACMSDQ8TDX5 336 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 SREK1Q8WXA9 508 aaKnown RBP20.75■□□□□ 0.91
SSBP3-216ENST00000610401 SERPINI1Q99574 410 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 SPON1Q9HCB6 807 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 DDIT4Q9NX09 232 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 DNAJB4Q9UDY4 337 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 CDYLQ9Y232 598 aa20.75■□□□□ 0.91
SSBP3-216ENST00000610401 ANKRD33BA6NCL7 494 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 PKDCCQ504Y2 493 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 RIOX2Q8IUF8 465 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 CPNE9Q8IYJ1 553 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 TDRKHQ9Y2W6 561 aaKnown RBP20.74■□□□□ 0.91
SSBP3-216ENST00000610401 COPG1Q9Y678 874 aaKnown RBP20.74■□□□□ 0.91
SSBP3-216ENST00000610401 ZCWPW2A0A1B0GU75 182 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 USP2O75604 605 aaPredicted RBP20.74■□□□□ 0.91
SSBP3-216ENST00000610401 CLIC3O95833 236 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 USP17L7P0C7H9 530 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 LAMC2Q13753 1193 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 CSHL1Q14406 222 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 TBC1D25Q3MII6 688 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 CEP97Q8IW35 865 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 PDCD6IPQ8WUM4 868 aaKnown RBP20.74■□□□□ 0.91
SSBP3-216ENST00000610401 DGCR14Q96DF8 476 aaKnown RBP20.74■□□□□ 0.91
SSBP3-216ENST00000610401 COQ10BQ9H8M1 238 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 AURKCQ9UQB9 309 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 CSADQ9Y600 493 aa20.74■□□□□ 0.91
SSBP3-216ENST00000610401 RPL5P46777 297 aaKnown RBP20.73■□□□□ 0.91
SSBP3-216ENST00000610401 CCDC153Q494R4 210 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 OGFRL1Q5TC84 451 aaPredicted RBP20.73■□□□□ 0.91
SSBP3-216ENST00000610401 STEAP4Q687X5 459 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 NOL11Q9H8H0 719 aaKnown RBP20.73■□□□□ 0.91
SSBP3-216ENST00000610401 CROCCQ5TZA2 2017 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 DPYSL4O14531 572 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 GRID2O43424 1007 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 ME2P23368 584 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 MATKP42679 507 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms