RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 OTUD3Q5T2D3 398 aaPredicted RBP14.46□□□□□ -0.1
PCDHB16-201ENST00000609684 GPSM1Q86YR5 675 aa14.46□□□□□ -0.1
PCDHB16-201ENST00000609684 PHACTR4Q8IZ21 702 aa14.46□□□□□ -0.1
PCDHB16-201ENST00000609684 ACMSDQ8TDX5 336 aa14.46□□□□□ -0.1
PCDHB16-201ENST00000609684 P2RY11Q96G91 374 aa14.46□□□□□ -0.1
PCDHB16-201ENST00000609684 ASB2Q96Q27 587 aa14.46□□□□□ -0.1
PCDHB16-201ENST00000609684 NDNQ99608 321 aa14.46□□□□□ -0.1
PCDHB16-201ENST00000609684 LRCH4O75427 683 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 IL2P60568 153 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 FRG1Q14331 258 aaKnown RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 TRMT11Q7Z4G4 463 aaKnown RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 PCDH20Q8N6Y1 951 aaKnown RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 COPS7BQ9H9Q2 264 aaPredicted RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 OR56A5P0C7T3 313 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 BRCC3P46736 316 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 NUP107P57740 925 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 SLC25A3Q00325 362 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 ERAP2Q6P179 960 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 TPGS1Q6ZTW0 290 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 ATG16L2Q8NAA4 619 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 KCTD4Q8WVF5 259 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 PYDC1Q8WXC3 89 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 SEMA3CQ99985 751 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 TBC1D10AQ9BXI6 508 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 SH3BP4Q9P0V3 963 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 PAPSS1O43252 624 aaPredicted RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 PSMG1O95456 288 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 FAM58BPP0C7Q3 252 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 VCLP18206 1134 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 POU1F1P28069 291 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 RAD23AP54725 363 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 INHBEP58166 350 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 FAM98BQ52LJ0 330 aaKnown RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 SAMD4BQ5PRF9 694 aaKnown RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 ARCQ7LC44 396 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 C1orf127Q8N9H9 656 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 MARK4Q96L34 752 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 ACE2Q9BYF1 805 aaPredicted RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 SENP6Q9GZR1 1112 aaPredicted RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 RNPEPL1Q9HAU8 725 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 MAFBQ9Y5Q3 323 aaPredicted RBP14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 AKAP12Q02952 1782 aa14.45□□□□□ -0.1
PCDHB16-201ENST00000609684 SMIM28A0A1B0GU29 152 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 MAXP61244 160 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 XRCC4Q13426 336 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 SLC25A52Q3SY17 297 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 HECTD3Q5T447 861 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 ZNF398Q8TD17 642 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 MCOLN3Q8TDD5 553 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 PANX3Q96QZ0 392 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 OMDQ99983 421 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 TMCC3Q9ULS5 477 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 SORCS3Q9UPU3 1222 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 DERAQ9Y315 318 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 SF3B1O75533 1304 aaKnown RBP eCLIP14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 PSMD12O00232 456 aaPredicted RBP14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 DARSP14868 501 aaKnown RBP14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 ATP5F1P24539 256 aaPredicted RBP14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 GRIA4P48058 902 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 MRPS22P82650 360 aaKnown RBP14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 TNS4Q8IZW8 715 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 PTGR2Q8N8N7 351 aaPredicted RBP14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 AGAP11Q8TF27 550 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 NMD3Q96D46 503 aaKnown RBP14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 MIEF1Q9NQG6 463 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 DMAC2Q9NW81 257 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 GIT1Q9Y2X7 761 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 COL1A2P08123 1366 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 MMP3P08254 477 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 GRK3P35626 688 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 RFX3P48380 749 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 CLCN5P51795 746 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 ZFP1Q6P2D0 407 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 TTC27Q6P3X3 843 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 IL27RAQ6UWB1 636 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 TRIM69Q86WT6 500 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 STAG3L4Q8TBR4 150 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 OSCP1Q8WVF1 389 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 SERAC1Q96JX3 654 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 WDR41Q9HAD4 459 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 DNMT3LQ9UJW3 386 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 TRIM17Q9Y577 477 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 VPS4BO75351 444 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 ZMPSTE24O75844 475 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 PCDH8O95206 1070 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 TFEBP19484 476 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 ANXA11P50995 505 aaKnown RBP14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 ACBD5Q5T8D3 534 aaPredicted RBP14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 STK40Q8N2I9 435 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 MBOAT7Q96N66 472 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 MECRQ9BV79 373 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 OPTCQ9UBM4 332 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 PADI4Q9UM07 663 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 EFR3BQ9Y2G0 817 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 SLC27A5Q9Y2P5 690 aa14.44□□□□□ -0.1
PCDHB16-201ENST00000609684 SMIM35A0A1B0GVV1 85 aa14.43□□□□□ -0.1
PCDHB16-201ENST00000609684 LRPAP1P30533 357 aa14.43□□□□□ -0.1
PCDHB16-201ENST00000609684 CTBP1Q13363 440 aa14.43□□□□□ -0.1
PCDHB16-201ENST00000609684 STRADAQ7RTN6 431 aa14.43□□□□□ -0.1
PCDHB16-201ENST00000609684 RNF145Q96MT1 663 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 242.2 ms