RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TUBA8Q9NY65 449 aaPredicted RBP22.74■■□□□ 1.23
SHANK2-220ENST00000608988 PACSIN3Q9UKS6 424 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 SCAF8Q9UPN6 1271 aaKnown RBP22.74■■□□□ 1.23
SHANK2-220ENST00000608988 MYRFQ9Y2G1 1151 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 AP4S1Q9Y587 144 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 SNX9Q9Y5X1 595 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 ARHGEF37A1IGU5 675 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 TCAF2A6NFQ2 919 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 FAM155AB1AL88 458 aaPredicted RBP22.73■■□□□ 1.23
SHANK2-220ENST00000608988 H3BNH8 94 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 NCAM2O15394 837 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 BMP10O95393 424 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 CLCN3P51790 818 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 ATXN1P54253 815 aaKnown RBP22.73■■□□□ 1.23
SHANK2-220ENST00000608988 RHDQ02161 417 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 STX5Q13190 355 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 GK3PQ14409 553 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 LY6KQ17RY6 165 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 KIZQ2M2Z5 673 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 CES3Q6UWW8 571 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 AMIGO2Q86SJ2 522 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 KCNMB4Q86W47 210 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 TMEM130Q8N3G9 435 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 FAR2Q96K12 515 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 MRPL45Q9BRJ2 306 aaKnown RBP22.73■■□□□ 1.23
SHANK2-220ENST00000608988 EFHD1Q9BUP0 239 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 TASP1Q9H6P5 420 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 ZNHIT2Q9UHR6 403 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 F5H423 210 aaPredicted RBP22.73■■□□□ 1.23
SHANK2-220ENST00000608988 H3BSA7 217 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 APBA3O96018 575 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 DPP6P42658 865 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 NUP107P57740 925 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 RAB15P59190 212 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 IKBKEQ14164 716 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 SOWAHAQ2M3V2 549 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 SH3D19Q5HYK7 790 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 ZNF484Q5JVG2 852 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 MAMDC4Q6UXC1 1216 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 PID1Q7Z2X4 250 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 TMEM151AQ8N4L1 468 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 LRRC52Q8N7C0 313 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 CCNYQ8ND76 341 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 CNKSR2Q8WXI2 1034 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 USP13Q92995 863 aaPredicted RBP22.73■■□□□ 1.23
SHANK2-220ENST00000608988 UNC93B1Q9H1C4 597 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 PRDM12Q9H4Q4 367 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 VPS45Q9NRW7 570 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 FAM49BQ9NUQ9 324 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 PIH1D1Q9NWS0 290 aaKnown RBP22.73■■□□□ 1.23
SHANK2-220ENST00000608988 SEPT10Q9P0V9 454 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 RNF11Q9Y3C5 154 aa22.73■■□□□ 1.23
SHANK2-220ENST00000608988 COPG1Q9Y678 874 aaKnown RBP22.73■■□□□ 1.23
SHANK2-220ENST00000608988 ZSCAN9O15535 394 aaPredicted RBP22.72■■□□□ 1.23
SHANK2-220ENST00000608988 DAB1O75553 588 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 C22orf31O95567 290 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 PCSK6P29122 969 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 PSME3P61289 254 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 SFSWAPQ12872 951 aaKnown RBP22.72■■□□□ 1.23
SHANK2-220ENST00000608988 SLC12A1Q13621 1099 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 LBX2Q6XYB7 198 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 KIF12Q96FN5 646 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 RHOJQ9H4E5 214 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 PLEKHA5Q9HAU0 1116 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 KLHL8Q9P2G9 620 aaPredicted RBP22.72■■□□□ 1.23
SHANK2-220ENST00000608988 ZDHHC2Q9UIJ5 367 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 TRHDEQ9UKU6 1024 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 SLC8A2Q9UPR5 921 aa22.72■■□□□ 1.23
SHANK2-220ENST00000608988 E2F8A0AVK6 867 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 C9IYK1 514 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 TRPA1O75762 1119 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 GJB1P08034 283 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 SLC7A1P30825 629 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 KCTD11Q693B1 232 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 NXNQ6DKJ4 435 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 CEP70Q8NHQ1 597 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 AGR3Q8TD06 166 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 AGAP2Q99490 1192 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 CAB39LQ9H9S4 337 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 SETD4Q9NVD3 440 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 NR2E3Q9Y5X4 410 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 PLXNA1Q9UIW2 1896 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 PTPN3P26045 913 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 GMPRP36959 345 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 GRM5P41594 1212 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 AIF1P55008 147 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 UGP2Q16851 508 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 INTS6LQ5JSJ4 861 aaKnown RBP22.71■■□□□ 1.23
SHANK2-220ENST00000608988 NOL9Q5SY16 702 aaKnown RBP22.71■■□□□ 1.23
SHANK2-220ENST00000608988 ACBD5Q5T8D3 534 aaPredicted RBP22.71■■□□□ 1.23
SHANK2-220ENST00000608988 IL23RQ5VWK5 629 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 ITPRIPL1Q6GPH6 555 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 LPCAT2Q7L5N7 544 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 ZNF554Q86TJ5 538 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 PYROXD2Q8N2H3 581 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 RMND5BQ96G75 393 aaPredicted RBP22.71■■□□□ 1.23
SHANK2-220ENST00000608988 MAGEB5Q9BZ81 275 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 PLGRKTQ9HBL7 147 aa22.71■■□□□ 1.23
SHANK2-220ENST00000608988 C20orf96Q9NUD7 363 aaPredicted RBP22.71■■□□□ 1.23
SHANK2-220ENST00000608988 PTBP2Q9UKA9 531 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms