RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 HIBCHQ6NVY1 386 aaPredicted RBP16.84■□□□□ 0.29
PMF1-206ENST00000606952 PARM1Q6UWI2 310 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 ZDHHC24Q6UX98 284 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 HOOK3Q86VS8 718 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 CCDC117Q8IWD4 279 aaPredicted RBP16.84■□□□□ 0.29
PMF1-206ENST00000606952 CNTD1Q8N815 330 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 CCDC110Q8TBZ0 833 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 LRRN4Q8WUT4 740 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 FGF14Q92915 247 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 ACDQ96AP0 544 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 PLA2G2FQ9BZM2 168 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 SP110Q9HB58 689 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 ATP13A1Q9HD20 1204 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 EIF2B3Q9NR50 452 aaKnown RBP16.84■□□□□ 0.29
PMF1-206ENST00000606952 CLEC4EQ9ULY5 219 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 SHOC2Q9UQ13 582 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 SLC27A6Q9Y2P4 619 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 ATP8A1Q9Y2Q0 1164 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 SNX24Q9Y343 169 aa16.84■□□□□ 0.29
PMF1-206ENST00000606952 NEDD8-MDP1E9PL57 170 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 J3KR12 359 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 CISD3P0C7P0 127 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 H2AFXP16104 143 aaPredicted RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 KCNA5P22460 613 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 MZF1P28698 734 aaPredicted RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 HLA-FP30511 346 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 CD68P34810 354 aaPredicted RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 CARSP49589 748 aaKnown RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 VASPP50552 380 aaPredicted RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 ARF5P84085 180 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 MORF4L2Q15014 288 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 TRIP13Q15645 432 aaPredicted RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 PARP6Q2NL67 630 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 IZUMO3Q5VZ72 239 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 ITPRIPL1Q6GPH6 555 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 NAT8LQ8N9F0 302 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 TTC16Q8NEE8 873 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 HNRNPLLQ8WVV9 542 aaKnown RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 CPT1BQ92523 772 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 HLA-CQ95604 372 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 NXPE3Q969Y0 559 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 PPP1R2P1Q96PQ5 205 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 PHF7Q9BWX1 381 aaPredicted RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 FOXP3Q9BZS1 431 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 PHACTR1Q9C0D0 580 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 GBA3Q9H227 469 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 DPH5Q9H2P9 285 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 ECT2Q9H8V3 914 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 PLK2Q9NYY3 685 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 INTS6Q9UL03 887 aaKnown RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 TPX2Q9ULW0 747 aaKnown RBP16.83■□□□□ 0.28
PMF1-206ENST00000606952 EYSQ5T1H1 3165 aa16.83■□□□□ 0.28
PMF1-206ENST00000606952 MUC22E2RYF6 1773 aaPredicted RBP16.82■□□□□ 0.28
PMF1-206ENST00000606952 METTL18O95568 372 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 CD160O95971 181 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 ARSAP15289 507 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 TPSB2P20231 275 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 CD70P32970 193 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 EIF2DP41214 584 aaKnown RBP16.82■□□□□ 0.28
PMF1-206ENST00000606952 VPS41P49754 854 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 CALCOCO2Q13137 446 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 KCNJ11Q14654 390 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 LBRQ14739 615 aaKnown RBP16.82■□□□□ 0.28
PMF1-206ENST00000606952 TPSAB1Q15661 275 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 SMAD2Q15796 467 aaKnown RBP16.82■□□□□ 0.28
PMF1-206ENST00000606952 SLC14A2Q15849 920 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 INO80DQ53TQ3 878 aaPredicted RBP16.82■□□□□ 0.28
PMF1-206ENST00000606952 TRIM68Q6AZZ1 485 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 IL31Q6EBC2 164 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 ASTLQ6HA08 431 aaPredicted RBP16.82■□□□□ 0.28
PMF1-206ENST00000606952 ARHGEF18Q6ZSZ5 1173 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 PPIL6Q8IXY8 311 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 CPA6Q8N4T0 437 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 WFIKKN2Q8TEU8 576 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 FCRL5Q96RD9 977 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 GORASP1Q9BQQ3 440 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 C2orf49Q9BVC5 232 aaPredicted RBP16.82■□□□□ 0.28
PMF1-206ENST00000606952 TRIM31Q9BZY9 425 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 MUC3BQ9H195 1237 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 NEUROG2Q9H2A3 272 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 KLHL8Q9P2G9 620 aaPredicted RBP16.82■□□□□ 0.28
PMF1-206ENST00000606952 VPS51Q9UID3 782 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 HPCAL4Q9UM19 191 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 MIA3Q5JRA6 1907 aa16.82■□□□□ 0.28
PMF1-206ENST00000606952 ERI2A8K979 691 aaKnown RBP16.81■□□□□ 0.28
PMF1-206ENST00000606952 DYNC1I1O14576 645 aa16.81■□□□□ 0.28
PMF1-206ENST00000606952 ZBTB24O43167 697 aaPredicted RBP16.81■□□□□ 0.28
PMF1-206ENST00000606952 JCHAINP01591 159 aa16.81■□□□□ 0.28
PMF1-206ENST00000606952 HLA-DQB2P05538 268 aa16.81■□□□□ 0.28
PMF1-206ENST00000606952 MYBL2P10244 700 aa16.81■□□□□ 0.28
PMF1-206ENST00000606952 PABPC1P11940 636 aaKnown RBP16.81■□□□□ 0.28
PMF1-206ENST00000606952 HSPA9P38646 679 aaKnown RBP16.81■□□□□ 0.28
PMF1-206ENST00000606952 ITGA8P53708 1063 aa16.81■□□□□ 0.28
PMF1-206ENST00000606952 GEMIN4P57678 1058 aaKnown RBP16.81■□□□□ 0.28
PMF1-206ENST00000606952 CDK16Q00536 496 aa16.81■□□□□ 0.28
PMF1-206ENST00000606952 SLC20A2Q08357 652 aa16.81■□□□□ 0.28
PMF1-206ENST00000606952 SKIV2LQ15477 1246 aaKnown RBP16.81■□□□□ 0.28
PMF1-206ENST00000606952 PUS10Q3MIT2 529 aaKnown RBP16.81■□□□□ 0.28
PMF1-206ENST00000606952 FUT11Q495W5 492 aa16.81■□□□□ 0.28
PMF1-206ENST00000606952 PITRM1Q5JRX3 1037 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms