RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 PYROXD2Q8N2H3 581 aa22.39■■□□□ 1.17
PPFIA3-208ENST00000602726 AADATQ8N5Z0 425 aa22.39■■□□□ 1.17
PPFIA3-208ENST00000602726 CCDC114Q96M63 670 aa22.39■■□□□ 1.17
PPFIA3-208ENST00000602726 TMEM248Q9NWD8 314 aa22.39■■□□□ 1.17
PPFIA3-208ENST00000602726 ADAMTS1Q9UHI8 967 aa22.39■■□□□ 1.17
PPFIA3-208ENST00000602726 FZD10Q9ULW2 581 aa22.39■■□□□ 1.17
PPFIA3-208ENST00000602726 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.39■■□□□ 1.177e-7■□□□□ 8.4
PPFIA3-208ENST00000602726 SCINQ9Y6U3 715 aa22.39■■□□□ 1.17
PPFIA3-208ENST00000602726 NCOR2Q9Y618 2525 aa22.39■■□□□ 1.17
PPFIA3-208ENST00000602726 TMEM191CA6NGB0 347 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 LRRC72A6NJI9 287 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 MCF2LO15068 1137 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 BCAT2O15382 392 aaPredicted RBP22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 CBFA2T2O43439 604 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 GYPCP04921 128 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 GALCP54803 685 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 SLC20A2Q08357 652 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 BIRC7Q96CA5 298 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 EPAS1Q99814 870 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 ISCUQ9H1K1 167 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 MRPL47Q9HD33 250 aaKnown RBP22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 NDFIP2Q9NV92 336 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 MYO1AQ9UBC5 1043 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 NEU3Q9UQ49 428 aa22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 NYNRINQ9P2P1 1898 aaKnown RBP22.38■■□□□ 1.17
PPFIA3-208ENST00000602726 MED19A0JLT2 244 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 C1QTNF3-AMACRE9PGA6 284 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 SMAD6O43541 496 aaKnown RBP22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 CREB3O43889 395 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 EPHB2P29323 1055 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 ACVRL1P37023 503 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 KIAA0895LQ68EN5 471 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 NCEH1Q6PIU2 408 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 OR2T34Q8NGX1 318 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 ACE2Q9BYF1 805 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 MAGEH1Q9H213 219 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 PPM1HQ9ULR3 514 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 ADAMTS9Q9P2N4 1935 aa22.37■■□□□ 1.17
PPFIA3-208ENST00000602726 RAMP2O60895 175 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 ZMPSTE24O75844 475 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 RNF8O76064 485 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 CASP14P31944 242 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 RECQLP46063 649 aaPredicted RBP22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 SERPINH1P50454 418 aaKnown RBP22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 NFKBIBQ15653 356 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 C22orf39Q6P5X5 142 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 MINDY1Q8N5J2 469 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 RNF214Q8ND24 703 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 OR2A12Q8NGT7 310 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 OR14C36Q8NHC7 312 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 PIP4K2CQ8TBX8 421 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 FNIP1Q8TF40 1166 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 ARHGEF2Q92974 986 aaKnown RBP22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 ZDHHC5Q9C0B5 715 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 TNKS2Q9H2K2 1166 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 SARDHQ9UL12 918 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 HPCAL4Q9UM19 191 aa22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 ASCC3Q8N3C0 2202 aaKnown RBP22.36■■□□□ 1.17
PPFIA3-208ENST00000602726 CD27P26842 260 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 CHRNA3P32297 505 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 DRD3P35462 400 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 METAP1P53582 386 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 ARF5P84085 180 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 POLD3Q15054 466 aaPredicted RBP22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 POM121L1PQ3SYA9 428 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 RTL3Q8N8U3 475 aaKnown RBP22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 C1orf216Q8TAB5 229 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 TRIM7Q9C029 511 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 CEP44Q9C0F1 390 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 CATSPERBQ9H7T0 1116 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 PCSK1NQ9UHG2 260 aa22.35■■□□□ 1.17
PPFIA3-208ENST00000602726 PCDH15Q96QU1 1955 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 KNL1Q8NG31 2342 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 OPHN1O60890 802 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 IGHV4-34P06331 123 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 DNA2P51530 1060 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 AFF3P51826 1226 aaKnown RBP22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 ADPRHP54922 357 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 GEMIN4P57678 1058 aaKnown RBP22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 ZNF252P-AS1Q0IIN9 211 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 GRIK2Q13002 908 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 SPECC1LQ69YQ0 1117 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 ZNF354CQ86Y25 554 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 OR2I1PQ8NGU4 316 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 GPATCH2LQ9NWQ4 482 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 AP4E1Q9UPM8 1137 aa22.34■■□□□ 1.17
PPFIA3-208ENST00000602726 TBC1D3DA0A087WVF3 549 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TBC1D3IA0A087WXS9 549 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 A0A087X0T9 212 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TBC1D3EA0A087X179 549 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TBC1D3KA0A087X1G2 549 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 CXorf51AA0A1B0GTR3 108 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TBC1D3FA6NER0 549 aaPredicted RBP22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 TBC1D3LB9A6J9 549 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 PLK4O00444 970 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 FGF10O15520 208 aaPredicted RBP22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 SLC7A4O43246 635 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 PRPSAP2O60256 369 aa22.33■■□□□ 1.17
PPFIA3-208ENST00000602726 PRNPP04156 253 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms