RNA–Protein interactions for RNA: ENST00000602253.5

ZNF546-209, Transcript of zinc finger protein 546, humanhuman

TSL 3

Gene ZNF546, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-209ENST00000602253 TBC1D3DA0A087WVF3 549 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TBC1D3IA0A087WXS9 549 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TBC1D3EA0A087X179 549 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TBC1D3KA0A087X1G2 549 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 PRAMEF33A0A0G2JMD5 474 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 FAM95CA0A1B0GW59 222 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TBC1D3FA6NER0 549 aaPredicted RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 KIAA1324LA8MWY0 1029 aaPredicted RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TCP11X1B4DZS4 312 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TBC1D3LB9A6J9 549 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 PRAMEF26H0Y7S4 382 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 MKRN2OSH3BPM6 223 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 NTN3O00634 580 aaPredicted RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 GABRDO14764 452 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 SLC27A2O14975 620 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 OGTO15294 1046 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 SGSM2O43147 1006 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 PRAMEF10O60809 474 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 RNGTTO60942 597 aaKnown RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 RTN3O95197 1032 aaPredicted RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 PENKP01210 267 aaPredicted RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 F13BP05160 661 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TBC1D3HP0C7X1 549 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 IRF1P10914 325 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 HGFP14210 728 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 CD1EP15812 388 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 IFNAR1P17181 557 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 RAB6AP20340 208 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 GUCY2CP25092 1073 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 CHMLP26374 656 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 ADMP35318 185 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 CHKAP35790 457 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TXKP42681 527 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 GOLGA8FQ08AF8 430 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 GOLGA8DPQ0D2H9 430 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 NTRK3Q16288 839 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 FNDC3BQ53EP0 1204 aaKnown RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TBC1D3GQ6DHY5 549 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TBC1D3CQ6IPX1 549 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 GUSBP11Q6P575 273 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 ASB18Q6ZVZ8 466 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 SND1Q7KZF4 910 aaKnown RBP eCLIP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 GDF7Q7Z4P5 450 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 CCDC13Q8IYE1 715 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TBC1D3Q8IZP1 549 aaPredicted RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 NUP93Q8N1F7 819 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 SORCS1Q8WY21 1168 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 USP7Q93009 1102 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 NAT6Q93015 286 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 NKD1Q969G9 470 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 HDAC11Q96DB2 347 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 ZNF560Q96MR9 790 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 TMEM74Q96NL1 305 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 SRRTQ9BXP5 876 aaKnown RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 SLC26A6Q9BXS9 759 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 SLC29A3Q9BZD2 475 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 RSPH9Q9H1X1 276 aaPredicted RBP4.39□□□□□ -1.71
ZNF546-209ENST00000602253 CCSER2Q9H7U1 834 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 EPB41L5Q9HCM4 733 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 ARHGAP20Q9P2F6 1191 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 CDH9Q9ULB4 789 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 L1RE1Q9UN81 338 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 ZNF510Q9Y2H8 683 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 CSNK1G3Q9Y6M4 447 aa4.39□□□□□ -1.71
ZNF546-209ENST00000602253 F8VP50 259 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 STMND1H3BQB6 276 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 TPP1O14773 563 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 SLC16A4O15374 487 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 NKX2-8O15522 239 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 ATP2C2O75185 946 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 MED24O75448 989 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 RNASEH2AO75792 299 aaKnown RBP4.38□□□□□ -1.71
ZNF546-209ENST00000602253 CYBBP04839 570 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 CD99P14209 185 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 GOT1P17174 413 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 CAPN3P20807 821 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 MUTP22033 750 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 ITGA3P26006 1051 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 RPA1P27694 616 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 CCKBRP32239 447 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 SLC8A1P32418 973 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 ATP5C1P36542 298 aaKnown RBP4.38□□□□□ -1.71
ZNF546-209ENST00000602253 PDX1P52945 283 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 HDAC4P56524 1084 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 HNRNPKP61978 463 aaKnown RBP eCLIP4.38□□□□□ -1.71
ZNF546-209ENST00000602253 CYP27A1Q02318 531 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 MRPL49Q13405 166 aaKnown RBP4.38□□□□□ -1.71
ZNF546-209ENST00000602253 HDAC1Q13547 482 aaPredicted RBP4.38□□□□□ -1.71
ZNF546-209ENST00000602253 FGL2Q14314 439 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 NECTIN1Q15223 517 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 NR0B2Q15466 257 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 INPP5JQ15735 1006 aaPredicted RBP4.38□□□□□ -1.71
ZNF546-209ENST00000602253 NPY5RQ15761 445 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 CALCRLQ16602 461 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 DEFB109BQ30KR1 87 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 FYB2Q5VWT5 728 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 NUGGCQ68CJ6 796 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 TMEM215Q68D42 235 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 CRTC1Q6UUV9 634 aa4.38□□□□□ -1.71
ZNF546-209ENST00000602253 DTHD1Q6ZMT9 781 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms