RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 FLRT1Q9NZU1 646 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 HEATR9A2RTY3 570 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 KCNK1O00180 336 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 TULP2O00295 520 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 MSH3P20585 1137 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 LPIN1Q14693 890 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 SLC30A9Q6PML9 568 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 FAM53CQ9NYF3 392 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 MAGEA13PA6NCF6 341 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 RNF103O00237 685 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 WASP42768 502 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 MRPS35P82673 323 aaKnown RBP11.25□□□□□ -0.61
ZNF558-207ENST00000601372 TBL3Q12788 808 aaKnown RBP11.25□□□□□ -0.61
ZNF558-207ENST00000601372 CYLC2Q14093 348 aaPredicted RBP11.25□□□□□ -0.61
ZNF558-207ENST00000601372 CSHL1Q14406 222 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 TEKT4Q8WW24 435 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 SPOCK2Q92563 424 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 LRRC40Q9H9A6 602 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 CASS4Q9NQ75 786 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 DTNAQ9Y4J8 743 aa11.25□□□□□ -0.61
ZNF558-207ENST00000601372 ADGRA3Q8IWK6 1321 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 ZMPSTE24O75844 475 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 CST3P01034 146 aaPredicted RBP11.24□□□□□ -0.61
ZNF558-207ENST00000601372 IQCF3P0C7M6 154 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 FSHRP23945 695 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 CYP4F8P98187 520 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 UGP2Q16851 508 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 TEDDM1Q5T9Z0 273 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 CFAP52Q8N1V2 620 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SLC9A7Q96T83 725 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 C2orf49Q9BVC5 232 aaPredicted RBP11.24□□□□□ -0.61
ZNF558-207ENST00000601372 FRMD8Q9BZ67 464 aaPredicted RBP11.24□□□□□ -0.61
ZNF558-207ENST00000601372 NSMCE4AQ9NXX6 385 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 TNRC6CQ9HCJ0 1690 aaKnown RBP11.24□□□□□ -0.61
ZNF558-207ENST00000601372 C1QTNF3-AMACRE9PGA6 284 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 EN2P19622 333 aaPredicted RBP11.24□□□□□ -0.61
ZNF558-207ENST00000601372 DYNC1I2Q13409 638 aaKnown RBP11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SLC45A4Q5BKX6 768 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SGO1Q5FBB7 561 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SPDYAQ5MJ70 313 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 PLK2Q9NYY3 685 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 KIF17Q9P2E2 1029 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 OR12D3Q9UGF7 316 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 PYGLP06737 847 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 PTAR1Q7Z6K3 402 aaPredicted RBP11.24□□□□□ -0.61
ZNF558-207ENST00000601372 POF1BQ8WVV4 589 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SPACA7Q96KW9 195 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 PIF1Q9H611 641 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 PCDHA11Q9Y5I1 949 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 MDM4O15151 490 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 ITGAVP06756 1048 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SERPINF2P08697 491 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SLC5A3P53794 718 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 CRYMQ14894 314 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 RNF43Q68DV7 783 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 RNF148Q8N7C7 305 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 CATSPER1Q8NEC5 780 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 NDRG1Q92597 394 aaKnown RBP11.24□□□□□ -0.61
ZNF558-207ENST00000601372 DPEP3Q9H4B8 488 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SYCE1LA8MT33 242 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 TPST1O60507 370 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 PGAM1P18669 254 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 PSMB4P28070 264 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SNRPD1P62314 119 aaKnown RBP11.24□□□□□ -0.61
ZNF558-207ENST00000601372 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 UGT3A1Q6NUS8 523 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 VSTM1Q6UX27 236 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 MON1BQ7L1V2 547 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 POLNQ7Z5Q5 900 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 NRBF2Q96F24 287 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 HSFY1Q96LI6 401 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 RAD9AQ99638 391 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 SH3GL3Q99963 347 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 PTPRHQ9HD43 1115 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 ZNF212Q9UDV6 495 aa11.24□□□□□ -0.61
ZNF558-207ENST00000601372 C4BPAP04003 597 aaKnown RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 ALADP13716 330 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 THOP1P52888 689 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 DRG2P55039 364 aaKnown RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 SETMARQ53H47 684 aaPredicted RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 SEL1L3Q68CR1 1132 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 LRRC4CQ9HCJ2 640 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 ZFP14Q9HCL3 533 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 MAN1C1Q9NR34 630 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 TMEM247A6NEH6 219 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 SUPT7LO94864 414 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 NFATC1O95644 943 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 ACADSP16219 412 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 ITGALP20701 1170 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 MZF1P28698 734 aaPredicted RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 HMOX2P30519 316 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 PTPN7P35236 360 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 INPP5AQ14642 412 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 ZACNQ401N2 412 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 VPS50Q96JG6 964 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 TBCBQ99426 244 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 ZYG11BQ9C0D3 744 aa11.23□□□□□ -0.61
ZNF558-207ENST00000601372 TRMT6Q9UJA5 497 aaKnown RBP11.23□□□□□ -0.61
ZNF558-207ENST00000601372 GRIN2DO15399 1336 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms