RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 ACVRL1P37023 503 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 EIF4A3P38919 411 aaKnown RBP13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 ARF5P84085 180 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 ERMARDQ5T6L9 678 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 FAM46CQ5VWP2 391 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 IL31Q6EBC2 164 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 SARM1Q6SZW1 724 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 LINGO4Q6UY18 593 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 Q6ZVU0 165 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 PSTKQ8IV42 348 aaKnown RBP13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 HDDC3Q8N4P3 179 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 AADATQ8N5Z0 425 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 RTL3Q8N8U3 475 aaKnown RBP13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 OR2A12Q8NGT7 310 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 C1orf216Q8TAB5 229 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 GANCQ8TET4 914 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 OMDQ99983 421 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 EDEM2Q9BV94 578 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 CEP44Q9C0F1 390 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 C6orf106Q9H6K1 298 aaPredicted RBP13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 CAPN10Q9HC96 672 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 SERGEFQ9UGK8 458 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 PCSK1NQ9UHG2 260 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 SARDHQ9UL12 918 aa13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.77□□□□□ -0.21
ARHGEF1-222ENST00000600517 A0A1W2PP55 124 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 C10orf142B7Z368 130 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 CDX4O14627 284 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 FGF10O15520 208 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 CREB3O43889 395 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 PRPSAP2O60256 369 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 ZNF821O75541 412 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 CD160O95971 181 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 CFIP05156 583 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 GNSP15586 552 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 DRD3P35462 400 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 PCK1P35558 622 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 PSMD8P48556 350 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 SERPINH1P50454 418 aaKnown RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 GALCP54803 685 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 YBEYP58557 167 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 GFPT1Q06210 699 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 PIGHQ14442 188 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 POLD3Q15054 466 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 CA9Q16790 459 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 ASTE1Q2TB18 679 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 CYP4V2Q6ZWL3 525 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 ERMP1Q7Z2K6 904 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 UMODL1-AS1Q8N2C9 162 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 FAM131CQ96AQ9 280 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 BIRC7Q96CA5 298 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 CCDC114Q96M63 670 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 PEBP4Q96S96 227 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 NOL6Q9H6R4 1146 aaKnown RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 CATSPERBQ9H7T0 1116 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 EIF2B4Q9UI10 523 aaKnown RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 AP4E1Q9UPM8 1137 aa13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 FARP1Q9Y4F1 1045 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF1-222ENST00000600517 A0A1B0GTW7 788 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 SSU72P8A0A1W2PR75 194 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 DCDC2BA2VCK2 349 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 C4orf47A7E2U8 309 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 ARHGAP33O14559 1287 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 KDELR3O43731 214 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 BNIP3LO60238 219 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 TPM1P09493 284 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 ENGP17813 658 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 CHRNA3P32297 505 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 HCAR3P49019 387 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 GEMIN4P57678 1058 aaKnown RBP13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 TBX2Q13207 712 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 SLC18A3Q16572 532 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 TSR1Q2NL82 804 aaKnown RBP13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 BOLA3Q53S33 107 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 C22orf39Q6P5X5 142 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 DGLUCYQ7Z3D6 616 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 PLPP6Q8IY26 295 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 PCDH20Q8N6Y1 951 aaKnown RBP13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 NIPA2Q8N8Q9 360 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 TMIEQ8NEW7 156 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 OR2T34Q8NGX1 318 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 PIP4K2CQ8TBX8 421 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 ISG20Q96AZ6 181 aaKnown RBP13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 SNRNP25Q9BV90 132 aaKnown RBP13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 MIR1-1HGQ9H1L0 117 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 DHX35Q9H5Z1 703 aaKnown RBP13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 OSGEPQ9NPF4 335 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 TMEM9BQ9NQ34 198 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 ABHD10Q9NUJ1 306 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 GPATCH2LQ9NWQ4 482 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 DONSONQ9NYP3 566 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 HPCAL4Q9UM19 191 aa13.75□□□□□ -0.21
ARHGEF1-222ENST00000600517 RALGAPA1Q6GYQ0 2036 aa13.74□□□□□ -0.21
ARHGEF1-222ENST00000600517 LRRC72A6NJI9 287 aa13.74□□□□□ -0.21
ARHGEF1-222ENST00000600517 C1QTNF3-AMACRE9PGA6 284 aa13.74□□□□□ -0.21
ARHGEF1-222ENST00000600517 EEF2KO00418 725 aaKnown RBP13.74□□□□□ -0.21
ARHGEF1-222ENST00000600517 SLC7A4O43246 635 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms