RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 VPS51Q9UID3 782 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 ERVW-1Q9UQF0 538 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 HEY1Q9Y5J3 304 aa12.54□□□□□ -0.4
TGFB1-204ENST00000600196 C5orf42Q9H799 3197 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 KRBA1A5PL33 1030 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 PRRT4C9JH25 899 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 CBX4O00257 560 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 ALOX15BO15296 676 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 MFSD11O43934 449 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 STK10O94804 968 aaKnown RBP12.53□□□□□ -0.4
TGFB1-204ENST00000600196 RBP3P10745 1247 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 CHRNA3P32297 505 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 CXCR5P32302 372 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 ACVRL1P37023 503 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 FNTAP49354 379 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 SERPINH1P50454 418 aaKnown RBP12.53□□□□□ -0.4
TGFB1-204ENST00000600196 NUBP1P53384 320 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 TUBB4BP68371 445 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 OTUD4Q01804 1114 aaKnown RBP12.53□□□□□ -0.4
TGFB1-204ENST00000600196 ADCY2Q08462 1091 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 BYSLQ13895 437 aaKnown RBP12.53□□□□□ -0.4
TGFB1-204ENST00000600196 PON2Q15165 354 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 SLC14A2Q15849 920 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 EOGTQ5NDL2 527 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 MARC1Q5VT66 337 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 TMEM215Q68D42 235 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 APCDD1Q8J025 514 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 SIX5Q8N196 739 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 MNS1Q8NEH6 495 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 ST13P5Q8NFI4 369 aaPredicted RBP12.53□□□□□ -0.4
TGFB1-204ENST00000600196 OR7D4Q8NG98 312 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 ATL2Q8NHH9 583 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 USP33Q8TEY7 942 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 SLCO2A1Q92959 643 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 RTP4Q96DX8 246 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 QKIQ96PU8 341 aaKnown RBP eCLIP12.53□□□□□ -0.4
TGFB1-204ENST00000600196 IL12RB2Q99665 862 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 GABRG3Q99928 467 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 TMEM245Q9H330 911 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 SP110Q9HB58 689 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 UBA2Q9UBT2 640 aaPredicted RBP12.53□□□□□ -0.4
TGFB1-204ENST00000600196 MFHAS1Q9Y4C4 1052 aa12.53□□□□□ -0.4
TGFB1-204ENST00000600196 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
TGFB1-204ENST00000600196 TCF20Q9UGU0 1960 aaKnown RBP12.52□□□□□ -0.4
TGFB1-204ENST00000600196 NUP205Q92621 2012 aa12.52□□□□□ -0.4
TGFB1-204ENST00000600196 A0A1W2PQ67 120 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 C5orf60A6NFR6 353 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 FAM170BA6NMN3 283 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 DFFAO00273 331 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 LIASO43766 372 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 PEX11BO96011 259 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 GSRP00390 522 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 CCNB1P14635 433 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 NTSR1P30989 418 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 SOX9P48436 509 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 DNA2P51530 1060 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 EIF3EP60228 445 aaKnown RBP12.52□□□□□ -0.41
TGFB1-204ENST00000600196 ARF5P84085 180 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 SFSWAPQ12872 951 aaKnown RBP12.52□□□□□ -0.41
TGFB1-204ENST00000600196 SIX1Q15475 284 aaPredicted RBP12.52□□□□□ -0.41
TGFB1-204ENST00000600196 OASLQ15646 514 aaKnown RBP12.52□□□□□ -0.41
TGFB1-204ENST00000600196 PTPRNQ16849 979 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 HEATR6Q6AI08 1181 aaKnown RBP12.52□□□□□ -0.41
TGFB1-204ENST00000600196 ALG1LQ6GMV1 187 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 SYDE1Q6ZW31 735 aaPredicted RBP12.52□□□□□ -0.41
TGFB1-204ENST00000600196 CCNYQ8ND76 341 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 CCHCR1Q8TD31 782 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 HCAR2Q8TDS4 363 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 GRK7Q8WTQ7 553 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 HTR3CQ8WXA8 447 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 CELF6Q96J87 481 aaKnown RBP12.52□□□□□ -0.41
TGFB1-204ENST00000600196 MRGPRX3Q96LB0 322 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 CIPCQ9C0C6 399 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 TBC1D17Q9HA65 648 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 FBRSL1Q9HCM7 1045 aaKnown RBP12.52□□□□□ -0.41
TGFB1-204ENST00000600196 SIT1Q9Y3P8 196 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 TICRRQ7Z2Z1 1910 aa12.52□□□□□ -0.41
TGFB1-204ENST00000600196 KIAA1549LQ6ZVL6 1849 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 EDDM13A0A1B0GTR0 161 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 WASH3PC4AMC7 463 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 H7C0C1 242 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 KRIT1O00522 736 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 FANCGO15287 622 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 OPHN1O60890 802 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 GCATO75600 419 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 PAPSS2O95340 614 aaPredicted RBP12.51□□□□□ -0.41
TGFB1-204ENST00000600196 SLC34A2O95436 690 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 CD160O95971 181 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
TGFB1-204ENST00000600196 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
TGFB1-204ENST00000600196 ACTN2P35609 894 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 ATP5OP48047 213 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 SNRPD1P62314 119 aaKnown RBP12.51□□□□□ -0.41
TGFB1-204ENST00000600196 DYNLT1P63172 113 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 RAD51Q06609 339 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 FZD5Q13467 585 aa12.51□□□□□ -0.41
TGFB1-204ENST00000600196 LBRQ14739 615 aaKnown RBP12.51□□□□□ -0.41
TGFB1-204ENST00000600196 HNRNPA1L2Q32P51 320 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms