RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	SLC44A2	Q8IWA5	706 aa	Predicted RBP	11.54	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FIBCD1	Q8N539	461 aa		11.54	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PJA1	Q8NG27	643 aa		11.54	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PEX13	Q92968	403 aa		11.54	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TLCD1	Q96CP7	247 aa		11.54	□□□□□ -0.56
SUPT5H-216	ENST00000599335	VPS35	Q96QK1	796 aa		11.54	□□□□□ -0.56
SUPT5H-216	ENST00000599335	WDR81	Q562E7	1941 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335		A8MXQ7	604 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	STK25	O00506	426 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PER2	O15055	1255 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SPAG7	O75391	227 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	BANF1	O75531	89 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	IGFBP6	P24592	240 aa	Predicted RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	IL1R2	P27930	398 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MLLT3	P42568	568 aa	Predicted RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	EIF3E	P60228	445 aa	Known RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	C16orf72	Q14CZ0	275 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	LIN52	Q52LA3	116 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ARHGAP24	Q8N264	748 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FAM71D	Q8N9W8	422 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CFAP61	Q8NHU2	1237 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CAPSL	Q8WWF8	208 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	C18orf25	Q96B23	403 aa	Predicted RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FAIM	Q9NVQ4	179 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	USP18	Q9UMW8	372 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RWDD3	Q9Y3V2	267 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335		A0A0G2JMZ2	1700 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	GOLGA8O	A6NCC3	632 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	GOLGA8N	F8WBI6	632 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TH	P07101	528 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PTDSS1	P48651	473 aa	Known RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	KRT6C	P48668	564 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	AFF1	P51825	1210 aa	Known RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	VCP	P55072	806 aa	Known RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	MMRN1	Q13201	1228 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SH3PXD2A	Q5TCZ1	1133 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PLPP4	Q5VZY2	271 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	LSMEM1	Q8N8F7	131 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	RXFP2	Q8WXD0	754 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PCDHGC3	Q9UN70	934 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SLC12A4	Q9UP95	1085 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TYW5	A2RUC4	315 aa	Known RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CILP	O75339	1184 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ENTPD5	O75356	428 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ARHGEF15	O94989	841 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	IL33	O95760	270 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ALDH2	P05091	517 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PAEP	P09466	180 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ATF4	P18848	351 aa	Predicted RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ACAT1	P24752	427 aa	Known RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FAM171A1	Q5VUB5	890 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SLC27A1	Q6PCB7	646 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CENPU	Q71F23	418 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PALM2	Q8IXS6	379 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CCDC33	Q8N5R6	958 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SPATA18	Q8TC71	538 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	LRRN4	Q8WUT4	740 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CDKL2	Q92772	493 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	STMN2	Q93045	179 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	GIMAP5	Q96F15	307 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SLC35C2	Q9NQQ7	365 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	THAP1	Q9NVV9	213 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.53	□□□□□ -0.56	6e-9	■■■□□ 18.6
SUPT5H-216	ENST00000599335	PLXNB2	O15031	1838 aa		11.53	□□□□□ -0.56
SUPT5H-216	ENST00000599335	TAF4	O00268	1085 aa		11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SCAMP3	O14828	347 aa	Known RBP	11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CLASP2	O75122	1294 aa	Known RBP	11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SERPINB7	O75635	380 aa		11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	IVD	P26440	423 aa		11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	CLVS2	Q5SYC1	327 aa		11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	XYLT1	Q86Y38	959 aa		11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	SCUBE3	Q8IX30	993 aa		11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	PYROXD1	Q8WU10	500 aa		11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	FAM149B1	Q96BN6	582 aa		11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	IPP	Q9Y573	584 aa		11.52	□□□□□ -0.56
SUPT5H-216	ENST00000599335	DNALI1	O14645	258 aa	Predicted RBP	11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	NBN	O60934	754 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	GSTA1	P08263	222 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	CDH3	P22223	829 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	CDKN2B	P42772	138 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	BRCC3	P46736	316 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	NR2C2	P49116	596 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	NRL	P54845	237 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	FASTKD3	Q14CZ7	662 aa	Known RBP	11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	INSC	Q1MX18	579 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	TTC23L	Q6PF05	361 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	KRT77	Q7Z794	578 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	UBR7	Q8N806	425 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	TTC8	Q8TAM2	541 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	KCTD4	Q8WVF5	259 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	SLCO2A1	Q92959	643 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	SERPINB12	Q96P63	405 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	LPIN3	Q9BQK8	851 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	CFHR5	Q9BXR6	569 aa		11.52	□□□□□ -0.57
SUPT5H-216	ENST00000599335	STMN3	Q9NZ72	180 aa		11.52	□□□□□ -0.57

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