RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 HHIPQ96QV1 700 aa15.42■□□□□ 0.06
GTF2F1-206ENST00000598607 ETNK2Q9NVF9 386 aa15.42■□□□□ 0.06
GTF2F1-206ENST00000598607 C2orf42Q9NWW7 574 aa15.42■□□□□ 0.06
GTF2F1-206ENST00000598607 SLCO3A1Q9UIG8 710 aa15.42■□□□□ 0.06
GTF2F1-206ENST00000598607 HCN4Q9Y3Q4 1203 aa15.42■□□□□ 0.06
GTF2F1-206ENST00000598607 RAD54BQ9Y620 910 aa15.42■□□□□ 0.06
GTF2F1-206ENST00000598607 A0A1W2PQF6 199 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 TTC34A8MYJ7 566 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 DFFAO00273 331 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 APOL1O14791 398 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 FTCDO95954 541 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 COL9A1P20849 921 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 GLDCP23378 1020 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 MARCKSL1P49006 195 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 PAPOLAP51003 745 aaKnown RBP15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 DLG2Q15700 870 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 PPP2R5EQ16537 467 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 TFDP3Q5H9I0 405 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 NCBP2-AS2Q69YL0 99 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 MFSD7Q6UXD7 560 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 SPOCD1Q6ZMY3 1216 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 RFX6Q8HWS3 928 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 LRRC49Q8IUZ0 686 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 ARHGAP12Q8IWW6 846 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 MAML2Q8IZL2 1156 aaPredicted RBP15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 CEP44Q9C0F1 390 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 SP110Q9HB58 689 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 BCCIPQ9P287 314 aaKnown RBP eCLIP15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 EBF1Q9UH73 591 aa15.41■□□□□ 0.06
GTF2F1-206ENST00000598607 GOLGA6L9A6NEM1 432 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 SP9P0CG40 484 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 TDGF1P13385 188 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 CDKN2BP42772 138 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 PEX5P50542 639 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 IL10RBQ08334 325 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 TAZQ16635 292 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 INO80DQ53TQ3 878 aaPredicted RBP15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 SLC9A4Q6AI14 798 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 ANO7Q6IWH7 933 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 KIAA1211LQ6NV74 962 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 C22orf39Q6P5X5 142 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 TSSK4Q6SA08 328 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 LINGO4Q6UY18 593 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 RASSF3Q86WH2 238 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 PGBD3Q8N328 593 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 ATPAF2Q8N5M1 289 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 PCDH20Q8N6Y1 951 aaKnown RBP15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 PQLC3Q8N755 202 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 ZNF366Q8N895 744 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 OR2T3Q8NH03 318 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 PTPRN2Q92932 1015 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 HES6Q96HZ4 224 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 PRSS16Q9NQE7 514 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 POLR3BQ9NW08 1133 aaPredicted RBP15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 UBA2Q9UBT2 640 aaPredicted RBP15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 MFHAS1Q9Y4C4 1052 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 THADAQ6YHU6 1953 aa15.4■□□□□ 0.06
GTF2F1-206ENST00000598607 AXIN1O15169 862 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 MFSD11O43934 449 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 PRAMEF11O60813 436 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 RNASEH1O60930 286 aaKnown RBP15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 SIN3BO75182 1162 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 MT-CO1P00395 513 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 MX2P20592 715 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 MSNP26038 577 aaKnown RBP15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 RECQLP46063 649 aaPredicted RBP15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 PTPN5P54829 565 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 RFTN1Q14699 578 aaPredicted RBP15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 BZW1Q7L1Q6 419 aaKnown RBP15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 DSG4Q86SJ6 1040 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 WDR5BQ86VZ2 330 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 LONP2Q86WA8 852 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 REXO1L1PQ8IX06 675 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 FRS2Q8WU20 508 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 NSMCE1Q8WV22 266 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 HMGB4Q8WW32 186 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 OR8D1Q8WZ84 308 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 ISG20Q96AZ6 181 aaKnown RBP15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 ZNF599Q96NL3 588 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 CD248Q9HCU0 757 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 ZSCAN32Q9NX65 697 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 IPO11Q9UI26 975 aaKnown RBP15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 PACSIN2Q9UNF0 486 aaPredicted RBP15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 EFR3BQ9Y2G0 817 aa15.39■□□□□ 0.05
GTF2F1-206ENST00000598607 hCG_1818297A0A087WSY0 165 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 ALOX15BO15296 676 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 DDX3YO15523 660 aaKnown RBP15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 SMAD6O43541 496 aaKnown RBP15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 GABRG2P18507 467 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 NDUFV2P19404 249 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 TGM2P21980 687 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 PTPN7P35236 360 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 COPAP53621 1224 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 GALNT2Q10471 571 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 BYSLQ13895 437 aaKnown RBP15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 ELAVL3Q14576 367 aaKnown RBP15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 C9orf64Q5T6V5 341 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 TMCO4Q5TGY1 634 aa15.38■□□□□ 0.05
GTF2F1-206ENST00000598607 MEI1Q5TIA1 1274 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms