RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 IVDP26440 423 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 HLA-FP30511 346 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 CD70P32970 193 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 CALCOCO2Q13137 446 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 SLC12A1Q13621 1099 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 HNRNPDQ14103 355 aaKnown RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 TMCO4Q5TGY1 634 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 IZUMO3Q5VZ72 239 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 CPA6Q8N4T0 437 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 BBOF1Q8ND07 529 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 USP33Q8TEY7 942 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 IFT81Q8WYA0 676 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 ALG14Q96F25 216 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 LMLNQ96KR4 655 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 ZNF599Q96NL3 588 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 XPO6Q96QU8 1125 aaKnown RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 IL12RB2Q99665 862 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 C2orf49Q9BVC5 232 aaPredicted RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 SLC2A11Q9BYW1 496 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 ABCB8Q9NUT2 735 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 GRHL1Q9NZI5 618 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 WHRNQ9P202 907 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 TRHDEQ9UKU6 1024 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 RAB21Q9UL25 225 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 NDC80O14777 642 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 GDI1P31150 447 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 CARSP49589 748 aaKnown RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 RENBPP51606 427 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 BASP1P80723 227 aaKnown RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 TNK2Q07912 1038 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 HLTFQ14527 1009 aaKnown RBP eCLIP14.95□□□□□ -0.02
VRK3-212ENST00000596814 PLEKHG6Q3KR16 790 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 MARC1Q5VT66 337 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 ITPRIPL1Q6GPH6 555 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 PID1Q7Z2X4 250 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 APCDD1Q8J025 514 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 TAB3Q8N5C8 712 aaPredicted RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 NAT16Q8N8M0 369 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 TEKT5Q96M29 485 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 AGAP3Q96P47 875 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 RPP25Q9BUL9 199 aaKnown RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 TRMT61BQ9BVS5 477 aaKnown RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 PHF7Q9BWX1 381 aaPredicted RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 RAB6BQ9NRW1 208 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 UBA2Q9UBT2 640 aaPredicted RBP14.95□□□□□ -0.02
VRK3-212ENST00000596814 GGA2Q9UJY4 613 aa14.95□□□□□ -0.02
VRK3-212ENST00000596814 EYSQ5T1H1 3165 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 KIAA1549LQ6ZVL6 1849 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 ZBTB24O43167 697 aaPredicted RBP14.94□□□□□ -0.02
VRK3-212ENST00000596814 SNAP91O60641 907 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 PABPC1P11940 636 aaKnown RBP14.94□□□□□ -0.02
VRK3-212ENST00000596814 ITIH2P19823 946 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 FDFT1P37268 417 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 ARF5P84085 180 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 NR1H3Q13133 447 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 RUNX3Q13761 415 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 LBRQ14739 615 aaKnown RBP14.94□□□□□ -0.02
VRK3-212ENST00000596814 LEXMQ3ZCV2 418 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 PITRM1Q5JRX3 1037 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 ASTLQ6HA08 431 aaPredicted RBP14.94□□□□□ -0.02
VRK3-212ENST00000596814 LEKR1Q6ZMV7 388 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 ZNF419Q96HQ0 510 aaPredicted RBP14.94□□□□□ -0.02
VRK3-212ENST00000596814 GBA3Q9H227 469 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 DNAJC17Q9NVM6 304 aaKnown RBP14.94□□□□□ -0.02
VRK3-212ENST00000596814 RBM22Q9NW64 420 aaKnown RBP eCLIP14.94□□□□□ -0.024e-6■■■■□ 24.3
VRK3-212ENST00000596814 RSPH14Q9UHP6 348 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 VPS51Q9UID3 782 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 TPX2Q9ULW0 747 aaKnown RBP14.94□□□□□ -0.02
VRK3-212ENST00000596814 TTLL3Q9Y4R7 772 aa14.94□□□□□ -0.02
VRK3-212ENST00000596814 MIA3Q5JRA6 1907 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 OTOL1A6NHN0 477 aaPredicted RBP14.93□□□□□ -0.02
VRK3-212ENST00000596814 ZMPSTE24O75844 475 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 METTL18O95568 372 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 HLA-DQB2P05538 268 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 PSMB4P28070 264 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 MMP13P45452 471 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 PLK1P53350 603 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 ITGA8P53708 1063 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 SLC10A7Q0GE19 358 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 ZNF235Q14590 738 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 RFTN1Q14699 578 aaPredicted RBP14.93□□□□□ -0.02
VRK3-212ENST00000596814 SMAD2Q15796 467 aaKnown RBP14.93□□□□□ -0.02
VRK3-212ENST00000596814 FUT11Q495W5 492 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 FAXCQ5TGI0 409 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 PCGF5Q86SE9 256 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 C12orf40Q86WS4 652 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 GSPT2Q8IYD1 628 aaKnown RBP14.93□□□□□ -0.02
VRK3-212ENST00000596814 BBS5Q8N3I7 341 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 TEX26Q8N6G2 289 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 CNTD1Q8N815 330 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.93□□□□□ -0.02
VRK3-212ENST00000596814 EIF1ADQ8N9N8 165 aaKnown RBP14.93□□□□□ -0.02
VRK3-212ENST00000596814 ACDQ96AP0 544 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 FAM129AQ9BZQ8 928 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 HAUS2Q9NVX0 235 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 IGSF9Q9P2J2 1179 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 FBXO10Q9UK96 956 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 INTS6Q9UL03 887 aaKnown RBP14.93□□□□□ -0.02
VRK3-212ENST00000596814 NFU1Q9UMS0 254 aa14.93□□□□□ -0.02
VRK3-212ENST00000596814 TICRRQ7Z2Z1 1910 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms