RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CDX2Q99626 313 aaPredicted RBP15.04■□□□□ -0
SHKBP1-211ENST00000595945 FAM83CQ9BQN1 747 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 GORASP1Q9BQQ3 440 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 FEM1AQ9BSK4 669 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 CEP41Q9BYV8 373 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 SP110Q9HB58 689 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 ETNK1Q9HBU6 452 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 ATP13A1Q9HD20 1204 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 PLK2Q9NYY3 685 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 EPS15L1Q9UBC2 864 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 FAM153AQ9UHL3 310 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 FBXO10Q9UK96 956 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 SHOC2Q9UQ13 582 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 ATP8A1Q9Y2Q0 1164 aa15.04■□□□□ -0
SHKBP1-211ENST00000595945 TCRBV7S3A2A0A539 114 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 SMAPO00193 183 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 CHADO15335 359 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 ZBTB24O43167 697 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 HOXC11O43248 304 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 GBP2P32456 591 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 CSKP41240 450 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 CBLBQ13191 982 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 SLC12A1Q13621 1099 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 PDGFRLQ15198 375 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 BEND6Q5SZJ8 279 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 TMCO4Q5TGY1 634 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 ITPRIPL1Q6GPH6 555 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 ASTLQ6HA08 431 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 EMBQ6PCB8 327 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 Q7L0L9 218 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 PID1Q7Z2X4 250 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 KIAA0907Q7Z7F0 614 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.03■□□□□ -0
SHKBP1-211ENST00000595945 ZNF557Q8N988 423 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 DCAF4L2Q8NA75 395 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 USP33Q8TEY7 942 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 BHMTQ93088 406 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 CAVIN3Q969G5 261 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 GUCD1Q96NT3 240 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 SPON2Q9BUD6 331 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 BBS2Q9BXC9 721 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 SLC2A11Q9BYW1 496 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 PLA2G2FQ9BZM2 168 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 MUC3BQ9H195 1237 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 GBA3Q9H227 469 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 UBE2ZQ9H832 354 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 GLOD4Q9HC38 313 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 RAB6BQ9NRW1 208 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 ARGLU1Q9NWB6 273 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 KIAA1522Q9P206 1035 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 KLHL8Q9P2G9 620 aaPredicted RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 INTS6Q9UL03 887 aaKnown RBP15.03■□□□□ -0
SHKBP1-211ENST00000595945 TICRRQ7Z2Z1 1910 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 COL4A2P08572 1712 aa15.03■□□□□ -0
SHKBP1-211ENST00000595945 F5P12259 2224 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 CXorf51AA0A1B0GTR3 108 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 NEDD8-MDP1E9PL57 170 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 ECI2O75521 394 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 TMEM63AO94886 807 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 CD160O95971 181 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 HLA-DQB2P05538 268 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 TYRP14679 529 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 ARSAP15289 507 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 NFKB1P19838 968 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 TPSB2P20231 275 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 GLDCP23378 1020 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 PSMB4P28070 264 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 CD70P32970 193 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 RENBPP51606 427 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 SLC10A7Q0GE19 358 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 SMAD4Q13485 552 aaKnown RBP15.02■□□□□ -0
SHKBP1-211ENST00000595945 TPSAB1Q15661 275 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 GAB4Q2WGN9 574 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 PLEKHG6Q3KR16 790 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 MAP9Q49MG5 647 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 TRIM68Q6AZZ1 485 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 IL31Q6EBC2 164 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 PARM1Q6UWI2 310 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 OTOP3Q7RTS5 596 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 CCDC117Q8IWD4 279 aaPredicted RBP15.02■□□□□ -0
SHKBP1-211ENST00000595945 APCDD1Q8J025 514 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 TAB3Q8N5C8 712 aaPredicted RBP15.02■□□□□ -0
SHKBP1-211ENST00000595945 FGF14Q92915 247 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 EXOC4Q96A65 974 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 FMO2Q99518 471 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 TXLNGYQ9BZA5 131 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 FOXP3Q9BZS1 431 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 HPS4Q9NQG7 708 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 EIF2B3Q9NR50 452 aaKnown RBP15.02■□□□□ -0
SHKBP1-211ENST00000595945 RBM22Q9NW64 420 aaKnown RBP eCLIP15.02■□□□□ -0
SHKBP1-211ENST00000595945 THG1LQ9NWX6 298 aaKnown RBP15.02■□□□□ -0
SHKBP1-211ENST00000595945 UBA2Q9UBT2 640 aaPredicted RBP15.02■□□□□ -0
SHKBP1-211ENST00000595945 VPS51Q9UID3 782 aa15.02■□□□□ -0
SHKBP1-211ENST00000595945 ANHXE9PGG2 379 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 H3BQ06 376 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 MBTPS2O43462 519 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 SNAP91O60641 907 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 NFATC1O95644 943 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 ADH1CP00326 375 aa15.01□□□□□ -0.01
SHKBP1-211ENST00000595945 CISD3P0C7P0 127 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms