RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 RNF25Q96BH1 459 aaPredicted RBP23.38■■□□□ 1.33
PNKP-205ENST00000595081 FAF2Q96CS3 445 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 MRGPRX1Q96LB2 322 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 TSGA10Q9BZW7 698 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 DDX56Q9NY93 547 aaKnown RBP23.38■■□□□ 1.33
PNKP-205ENST00000595081 GUCA1BQ9UMX6 200 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 CAPN6Q9Y6Q1 641 aa23.38■■□□□ 1.33
PNKP-205ENST00000595081 EDDM13A0A1B0GTR0 161 aa23.37■■□□□ 1.33
PNKP-205ENST00000595081 DFFAO00273 331 aa23.37■■□□□ 1.33
PNKP-205ENST00000595081 ZBTB24O43167 697 aaPredicted RBP23.37■■□□□ 1.33
PNKP-205ENST00000595081 CD160O95971 181 aa23.37■■□□□ 1.33
PNKP-205ENST00000595081 SERPINH1P50454 418 aaKnown RBP23.37■■□□□ 1.33
PNKP-205ENST00000595081 SRSF5Q13243 272 aaKnown RBP23.37■■□□□ 1.33
PNKP-205ENST00000595081 KIAA1324Q6UXG2 1013 aaKnown RBP23.37■■□□□ 1.33
PNKP-205ENST00000595081 Q6ZVU0 165 aa23.37■■□□□ 1.33
PNKP-205ENST00000595081 PQLC3Q8N755 202 aa23.37■■□□□ 1.33
PNKP-205ENST00000595081 OR2T3Q8NH03 318 aa23.37■■□□□ 1.33
PNKP-205ENST00000595081 PTPRN2Q92932 1015 aa23.37■■□□□ 1.33
PNKP-205ENST00000595081 PCDHGA2Q9Y5H1 932 aa23.37■■□□□ 1.33
PNKP-205ENST00000595081 VPS13AQ96RL7 3174 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 CCDC163A0A0D9SF12 145 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 TARSL2A2RTX5 802 aaKnown RBP23.36■■□□□ 1.33
PNKP-205ENST00000595081 ARHGAP42A6NI28 874 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 KRT86O43790 486 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 SLC20A2Q08357 652 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 ODF2Q5BJF6 829 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 NCBP2-AS2Q69YL0 99 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 ARHGAP36Q6ZRI8 547 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 TMPRSS6Q8IU80 811 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 STK40Q8N2I9 435 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 LZTR1Q8N653 840 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 IRF2BPLQ9H1B7 796 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 TNKS2Q9H2K2 1166 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 PRDM16Q9HAZ2 1276 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 LZTFL1Q9NQ48 299 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 INVSQ9Y283 1065 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 PPP2R2CQ9Y2T4 447 aa23.36■■□□□ 1.33
PNKP-205ENST00000595081 FCF1Q9Y324 198 aaKnown RBP23.36■■□□□ 1.33
PNKP-205ENST00000595081 NUP205Q92621 2012 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 J3KR12 359 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 MFSD11O43934 449 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 BNIP3LO60238 219 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 CLCN6P51797 869 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 C22orf39Q6P5X5 142 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 MFSD7Q6UXD7 560 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 NT5DC3Q86UY8 548 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 KATNAL2Q8IYT4 538 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 RNF10Q8N5U6 811 aaKnown RBP23.35■■□□□ 1.33
PNKP-205ENST00000595081 RNF157Q96PX1 679 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 CD93Q9NPY3 652 aa23.35■■□□□ 1.33
PNKP-205ENST00000595081 HRO43593 1189 aa23.34■■□□□ 1.33
PNKP-205ENST00000595081 LILRB5O75023 590 aa23.34■■□□□ 1.33
PNKP-205ENST00000595081 FTCDO95954 541 aa23.34■■□□□ 1.33
PNKP-205ENST00000595081 CTNNA1P35221 906 aaKnown RBP23.34■■□□□ 1.33
PNKP-205ENST00000595081 SERPINB6P35237 376 aa23.34■■□□□ 1.33
PNKP-205ENST00000595081 GEMIN4P57678 1058 aaKnown RBP23.34■■□□□ 1.33
PNKP-205ENST00000595081 LLGL1Q15334 1064 aa23.34■■□□□ 1.33
PNKP-205ENST00000595081 RLN3Q8WXF3 142 aa23.34■■□□□ 1.33
PNKP-205ENST00000595081 SIPA1Q96FS4 1042 aa23.34■■□□□ 1.33
PNKP-205ENST00000595081 RSPH9Q9H1X1 276 aaPredicted RBP23.34■■□□□ 1.33
PNKP-205ENST00000595081 PDFQ9HBH1 243 aa23.34■■□□□ 1.33
PNKP-205ENST00000595081 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.34■■□□□ 1.33
PNKP-205ENST00000595081 NYNRINQ9P2P1 1898 aaKnown RBP23.33■■□□□ 1.33
PNKP-205ENST00000595081 ZSCAN5CA6NGD5 496 aaPredicted RBP23.33■■□□□ 1.33
PNKP-205ENST00000595081 ZNF487B1APH4 448 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 PRAMEF11O60813 436 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 ZNF821O75541 412 aaPredicted RBP23.33■■□□□ 1.33
PNKP-205ENST00000595081 MAP3K6O95382 1288 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 CTNNA2P26232 953 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 CDKN2BP42772 138 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 RPS14P62263 151 aaKnown RBP23.33■■□□□ 1.33
PNKP-205ENST00000595081 PAFAH1B3Q15102 231 aaKnown RBP23.33■■□□□ 1.33
PNKP-205ENST00000595081 ZC3H14Q6PJT7 736 aaKnown RBP23.33■■□□□ 1.33
PNKP-205ENST00000595081 ZNF662Q6ZS27 426 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 PEX26Q7Z412 305 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 SYCE1Q8N0S2 351 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 FRMD1Q8N878 549 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 PRCCQ92733 491 aaPredicted RBP23.33■■□□□ 1.33
PNKP-205ENST00000595081 FAM129BQ96TA1 746 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 FBRSQ9HAH7 460 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 IPO11Q9UI26 975 aaKnown RBP23.33■■□□□ 1.33
PNKP-205ENST00000595081 AMFRQ9UKV5 643 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 PACSIN2Q9UNF0 486 aaPredicted RBP23.33■■□□□ 1.33
PNKP-205ENST00000595081 PCDHA3Q9Y5H8 950 aa23.33■■□□□ 1.33
PNKP-205ENST00000595081 CXorf51AA0A1B0GTR3 108 aa23.32■■□□□ 1.32
PNKP-205ENST00000595081 RPP40O75818 363 aaKnown RBP23.32■■□□□ 1.32
PNKP-205ENST00000595081 TMCC1O94876 653 aa23.32■■□□□ 1.32
PNKP-205ENST00000595081 ZRANB2O95218 330 aaKnown RBP eCLIP23.32■■□□□ 1.32
PNKP-205ENST00000595081 DNA2P51530 1060 aa23.32■■□□□ 1.32
PNKP-205ENST00000595081 NHLH1Q02575 133 aa23.32■■□□□ 1.32
PNKP-205ENST00000595081 GBE1Q04446 702 aa23.32■■□□□ 1.32
PNKP-205ENST00000595081 ELAVL3Q14576 367 aaKnown RBP23.32■■□□□ 1.32
PNKP-205ENST00000595081 USP39Q53GS9 565 aaKnown RBP23.32■■□□□ 1.32
PNKP-205ENST00000595081 ZNF776Q68DI1 518 aaPredicted RBP23.32■■□□□ 1.32
PNKP-205ENST00000595081 SPOCD1Q6ZMY3 1216 aa23.32■■□□□ 1.32
PNKP-205ENST00000595081 VSIG1Q86XK7 387 aa23.32■■□□□ 1.32
PNKP-205ENST00000595081 RFX6Q8HWS3 928 aa23.32■■□□□ 1.32
PNKP-205ENST00000595081 MMAAQ8IVH4 418 aaKnown RBP23.32■■□□□ 1.32
PNKP-205ENST00000595081 FAM160A2Q8N612 972 aaPredicted RBP23.32■■□□□ 1.32
PNKP-205ENST00000595081 OR2A12Q8NGT7 310 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms