RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 FAM72BQ86X60 149 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 DRC7Q8IY82 874 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 OR7D4Q8NG98 312 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 GANCQ8TET4 914 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 ZCCHC14Q8WYQ9 949 aaKnown RBP15.47■□□□□ 0.07
TRIM28-205ENST00000595028 OR8D1Q8WZ84 308 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 SYN2Q92777 582 aaPredicted RBP15.47■□□□□ 0.07
TRIM28-205ENST00000595028 TBC1D31Q96DN5 1066 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 FSCN3Q9NQT6 498 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 PARVAQ9NVD7 372 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 ADAMTS1Q9UHI8 967 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 FZD4Q9ULV1 537 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 NCKAP1Q9Y2A7 1128 aa15.47■□□□□ 0.07
TRIM28-205ENST00000595028 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.47■□□□□ 0.07
TRIM28-205ENST00000595028 KNL1Q8NG31 2342 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 TP53BP1Q12888 1972 aaPredicted RBP15.46■□□□□ 0.07
TRIM28-205ENST00000595028 A0A1B0GTW7 788 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 TAF4O00268 1085 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 ALOX15BO15296 676 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 RNASEH2AO75792 299 aaKnown RBP15.46■□□□□ 0.07
TRIM28-205ENST00000595028 MT-CO1P00395 513 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 IL1BP01584 269 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 RHOQP17081 205 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 DESP17661 470 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 C5AR1P21730 350 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 GLDCP23378 1020 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 SLC8A1P32418 973 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 MAPK8P45983 427 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 MAPKAPK2P49137 400 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 CLCN6P51797 869 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 GNA12Q03113 381 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 ACCSLQ4AC99 568 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 EFHC2Q5JST6 749 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 DAB2IPQ5VWQ8 1189 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 RWDD4Q6NW29 188 aaKnown RBP15.46■□□□□ 0.07
TRIM28-205ENST00000595028 TMC6Q7Z403 805 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 DSG4Q86SJ6 1040 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 DNAAF5Q86Y56 855 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 AADATQ8N5Z0 425 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 ATP11CQ8NB49 1132 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 SNX19Q92543 992 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 ZNF653Q96CK0 615 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 MAGEB5Q9BZ81 275 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 MIR1-1HGQ9H1L0 117 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 RETREG1Q9H6L5 497 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 ATP13A1Q9HD20 1204 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 TMEM248Q9NWD8 314 aa15.46■□□□□ 0.07
TRIM28-205ENST00000595028 EIF2B4Q9UI10 523 aaKnown RBP15.46■□□□□ 0.07
TRIM28-205ENST00000595028 PLXNA2O75051 1894 aa15.46■□□□□ 0.06
TRIM28-205ENST00000595028 ARHGAP33O14559 1287 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 RTN2O75298 545 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 ZMPSTE24O75844 475 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 FTLP02792 175 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-205ENST00000595028 GYPCP04921 128 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 TPM3P06753 285 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 PSMA2P25787 234 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 L1CAMP32004 1257 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 ETFBP38117 255 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 AIF1P55008 147 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 ZBED6P86452 979 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 RETSATQ6NUM9 610 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 SCYL2Q6P3W7 929 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 C22orf39Q6P5X5 142 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 LINGO4Q6UY18 593 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 C1orf216Q8TAB5 229 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 FAM131CQ96AQ9 280 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 TRIM11Q96F44 468 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 OMDQ99983 421 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 SPON2Q9BUD6 331 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 SCNM1Q9BWG6 230 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 GTPBP2Q9BX10 602 aaKnown RBP15.45■□□□□ 0.06
TRIM28-205ENST00000595028 XPO4Q9C0E2 1151 aaKnown RBP15.45■□□□□ 0.06
TRIM28-205ENST00000595028 TSPY26PQ9H489 355 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 NDFIP2Q9NV92 336 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 CNOT8Q9UFF9 292 aaKnown RBP15.45■□□□□ 0.06
TRIM28-205ENST00000595028 CAPN11Q9UMQ6 739 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 BZW2Q9Y6E2 419 aaKnown RBP15.45■□□□□ 0.06
TRIM28-205ENST00000595028 SCINQ9Y6U3 715 aa15.45■□□□□ 0.06
TRIM28-205ENST00000595028 HELZ2Q9BYK8 2649 aaKnown RBP15.45■□□□□ 0.06
TRIM28-205ENST00000595028 C1QTNF3-AMACRE9PGA6 284 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 K7ERQ8 282 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 CBX4O00257 560 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 MCF2LO15068 1137 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 BCAT2O15382 392 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-205ENST00000595028 SMAD6O43541 496 aaKnown RBP15.44■□□□□ 0.06
TRIM28-205ENST00000595028 SYPP08247 313 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 MYBL1P10243 752 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 GOT1P17174 413 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 DRD3P35462 400 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 SERPINH1P50454 418 aaKnown RBP15.44■□□□□ 0.06
TRIM28-205ENST00000595028 ATXN3P54252 364 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-205ENST00000595028 ADPRHP54922 357 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 ARF5P84085 180 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 GRIK2Q13002 908 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 SEMA3BQ13214 749 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 KIAA0895LQ68EN5 471 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 VPS36Q86VN1 386 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 PYROXD2Q8N2H3 581 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 HDDC3Q8N4P3 179 aa15.44■□□□□ 0.06
TRIM28-205ENST00000595028 FNIP1Q8TF40 1166 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms