RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 PSMD8P48556 350 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 HCAR3P49019 387 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 GEMIN4P57678 1058 aaKnown RBP14.87□□□□□ -0.03
VRK3-206ENST00000594090 YBEYP58557 167 aaPredicted RBP14.87□□□□□ -0.03
VRK3-206ENST00000594090 CREB5Q02930 508 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 SLC20A2Q08357 652 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 DPYSQ14117 519 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 HADHQ16836 314 aaKnown RBP14.87□□□□□ -0.03
VRK3-206ENST00000594090 PARP15Q460N3 678 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 ARMCX6Q7L4S7 300 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 CYP2U1Q7Z449 544 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 SLC41A1Q8IVJ1 513 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 RHOT2Q8IXI1 618 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 CEP44Q9C0F1 390 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 LRRC19Q9H756 370 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 CWC15Q9P013 229 aaKnown RBP14.87□□□□□ -0.03
VRK3-206ENST00000594090 ACTL7AQ9Y615 435 aa14.87□□□□□ -0.03
VRK3-206ENST00000594090 BCLAF3A2AJT9 711 aaKnown RBP14.86□□□□□ -0.03
VRK3-206ENST00000594090 SOWAHDA6NJG2 315 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 TMEM110-MUSTN1A8MSY1 372 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 ALOX15BO15296 676 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 MID1O15344 667 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 KDELR3O43731 214 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 BNIP3LO60238 219 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 ADH1BP00325 375 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 IL1BP01584 269 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 ERCC2P18074 760 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 SLC8A1P32418 973 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 ARL4AP40617 200 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 SSR1P43307 286 aaKnown RBP14.86□□□□□ -0.03
VRK3-206ENST00000594090 NDST2P52849 883 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 TAS2R40P59535 323 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 CCDC6Q16204 474 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 PLA2G2CQ5R387 149 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 LYSMD4Q5XG99 296 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 USP30Q70CQ3 517 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 DSG4Q86SJ6 1040 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 FAM124AQ86V42 546 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 ZNF354CQ86Y25 554 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 TMTC1Q8IUR5 882 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 KIAA2013Q8IYS2 634 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 DEFB119Q8N690 84 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 GPR161Q8N6U8 529 aaKnown RBP14.86□□□□□ -0.03
VRK3-206ENST00000594090 PCDH20Q8N6Y1 951 aaKnown RBP14.86□□□□□ -0.03
VRK3-206ENST00000594090 SPC24Q8NBT2 197 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 OR2A12Q8NGT7 310 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 CCDC114Q96M63 670 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 HSPA12BQ96MM6 686 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 GPR174Q9BXC1 333 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 KLC2Q9H0B6 622 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 TNKS2Q9H2K2 1166 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 SEMA4GQ9NTN9 838 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 IMPACTQ9P2X3 320 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 SERGEFQ9UGK8 458 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 FCF1Q9Y324 198 aaKnown RBP14.86□□□□□ -0.03
VRK3-206ENST00000594090 GPR179Q6PRD1 2367 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 NUP205Q92621 2012 aa14.86□□□□□ -0.03
VRK3-206ENST00000594090 ZFHX2Q9C0A1 2572 aaPredicted RBP14.85□□□□□ -0.03
VRK3-206ENST00000594090 A0A1W2PP55 124 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 ZSCAN5CA6NGD5 496 aaPredicted RBP14.85□□□□□ -0.03
VRK3-206ENST00000594090 MCF2LO15068 1137 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 ZNF821O75541 412 aaPredicted RBP14.85□□□□□ -0.03
VRK3-206ENST00000594090 C5AR1P21730 350 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 GJC1P36383 396 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 MAGEA1P43355 309 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 ZNF33AQ06730 810 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 SERINC3Q13530 473 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 MESDQ14696 234 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 TCEAL1Q15170 157 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 SPA17Q15506 151 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 CSRP2Q16527 193 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 POLNQ7Z5Q5 900 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 AADATQ8N5Z0 425 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 NPWQ8N729 165 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 ZNF419Q96HQ0 510 aaPredicted RBP14.85□□□□□ -0.03
VRK3-206ENST00000594090 CELF6Q96J87 481 aaKnown RBP14.85□□□□□ -0.03
VRK3-206ENST00000594090 CSPG4P5Q96PW8 444 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 BTBD1Q9H0C5 482 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 PCDH18Q9HCL0 1135 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 FBXL12Q9NXK8 326 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 SARDHQ9UL12 918 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 NCKAP1Q9Y2A7 1128 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 FARP1Q9Y4F1 1045 aaPredicted RBP14.85□□□□□ -0.03
VRK3-206ENST00000594090 RALGAPA1Q6GYQ0 2036 aa14.85□□□□□ -0.03
VRK3-206ENST00000594090 C1QTNF3-AMACRE9PGA6 284 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 NDUFA10O95299 355 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 CTSLP07711 333 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 ITPKAP23677 461 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 ACSL1P33121 698 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 ARHGAP25P42331 645 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 CDH6P55285 790 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 SFSWAPQ12872 951 aaKnown RBP14.84□□□□□ -0.03
VRK3-206ENST00000594090 KRT81Q14533 505 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 AFMIDQ63HM1 303 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 LEKR1Q6ZMV7 388 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 PRR23CQ6ZRP0 262 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 ARHGAP12Q8IWW6 846 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 HDDC3Q8N4P3 179 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 CADM4Q8NFZ8 388 aa14.84□□□□□ -0.03
VRK3-206ENST00000594090 PIP4K2CQ8TBX8 421 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms