RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TBC1D3KA0A087X1G2 549 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 GOLGA6L7A0A1B0GV03 622 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 A0A1W2PP55 124 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 TBC1D3FA6NER0 549 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 TBC1D3LB9A6J9 549 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 KCNK3O14649 394 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 ENC1O14682 589 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 MID1O15344 667 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 RRP8O43159 456 aaKnown RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 RFPL3O75679 317 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 LUC7L3O95232 432 aaKnown RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 IGHV4-34P06331 123 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 TBC1D3HP0C7X1 549 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 ZNF16P17020 682 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 SLC6A4P31645 630 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 ABCG1P45844 678 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 FMO5P49326 533 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 STX17P56962 302 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 SNX16P57768 344 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 GCNT1Q02742 428 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 OVGP1Q12889 678 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 PAK1Q13153 545 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 ILKQ13418 452 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 ELAVL3Q14576 367 aaKnown RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 ARSJQ5FYB0 599 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 MS4A13Q5J8X5 152 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 PITRM1Q5JRX3 1037 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 RABGAP1LQ5R372 815 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 C9orf64Q5T6V5 341 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 FAM46CQ5VWP2 391 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 TBC1D3GQ6DHY5 549 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 TBC1D3CQ6IPX1 549 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 KLHL10Q6JEL2 608 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 DHRS13Q6UX07 377 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 PRPF39Q86UA1 669 aaKnown RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 MMAAQ8IVH4 418 aaKnown RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 TBC1D3Q8IZP1 549 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 ATP6V0D2Q8N8Y2 350 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 OR14C36Q8NHC7 312 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 IQCDQ96DY2 449 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 SERAC1Q96JX3 654 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 CNDP2Q96KP4 475 aaKnown RBP9.73□□□□□ -0.85
BRCA1-226ENST00000591534 BTN2A3PQ96KV6 586 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 FAM81BQ96LP2 452 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 MIS12Q9H081 205 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 NEUROG2Q9H2A3 272 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 ERVMER34-1Q9H9K5 563 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 ZDHHC3Q9NYG2 299 aa9.73□□□□□ -0.85
BRCA1-226ENST00000591534 LAMA5O15230 3695 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 BAHCC1Q9P281 2608 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 CEP192Q8TEP8 1941 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 ADAMTS9Q9P2N4 1935 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 F5H5T6 163 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 TLR4O00206 839 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 PIK3R2O00459 728 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 SLC7A4O43246 635 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 MOCS2O96007 188 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-226ENST00000591534 IL1BP01584 269 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 CDK11BP21127 795 aaKnown RBP9.72□□□□□ -0.85
BRCA1-226ENST00000591534 PSMD8P48556 350 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 SGSHP51688 502 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 RPS24P62847 133 aaKnown RBP9.72□□□□□ -0.85
BRCA1-226ENST00000591534 IL9RQ01113 521 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 MEA1Q16626 185 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 SOWAHCQ53LP3 525 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-226ENST00000591534 DCAF6Q58WW2 860 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 IQCHQ86VS3 1027 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 CHSY1Q86X52 802 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 LGI2Q8N0V4 545 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 UBR7Q8N806 425 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 DQX1Q8TE96 717 aaKnown RBP9.72□□□□□ -0.85
BRCA1-226ENST00000591534 TFAP2BQ92481 460 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 RNF34Q969K3 372 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 FCRL2Q96LA5 508 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-226ENST00000591534 SLC6A18Q96N87 628 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 SPAG5Q96R06 1193 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 POPDC2Q9HBU9 364 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 GPAMQ9HCL2 828 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.72□□□□□ -0.85
BRCA1-226ENST00000591534 CTNND2Q9UQB3 1225 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 DMTF1Q9Y222 760 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 AK5Q9Y6K8 562 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 ITIH6Q6UXX5 1313 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 ITPR1Q14643 2758 aa9.72□□□□□ -0.85
BRCA1-226ENST00000591534 FAM149AA5PLN7 773 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 A6NHS1 94 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 TTC34A8MYJ7 566 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 C1QTNF3-AMACRE9PGA6 284 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 PDGFAP04085 211 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 KRT5P13647 590 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 ZNF18P17022 549 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 TACR2P21452 398 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 EEF1GP26641 437 aaKnown RBP9.71□□□□□ -0.86
BRCA1-226ENST00000591534 RXRGP48443 463 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 ADPRHP54922 357 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 YWHAZP63104 245 aaKnown RBP9.71□□□□□ -0.86
BRCA1-226ENST00000591534 CDK17Q00537 523 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 CCDC173Q0VFZ6 552 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 STAT4Q14765 748 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms