RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 TMEM92Q6UXU6 159 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 LEKR1Q6ZMV7 388 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 TP53INP2Q8IXH6 220 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 SH2D3CQ8N5H7 860 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 ZNF366Q8N895 744 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 RAD54BQ9Y620 910 aa19.55■□□□□ 0.72
DDX39A-214ENST00000590556 CXorf51AA0A1B0GTR3 108 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 K7ERQ8 282 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 ATP9BO43861 1147 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 SRCP12931 536 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 CLCN6P51797 869 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 NUBP1P53384 320 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 DLG2Q15700 870 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 HNRNPA1L2Q32P51 320 aaKnown RBP19.54■□□□□ 0.72
DDX39A-214ENST00000590556 ZNF569Q5MCW4 686 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 PLD5Q8N7P1 536 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 ERLEC1Q96DZ1 483 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 HEMGNQ9BXL5 484 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 SP110Q9HB58 689 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 POLMQ9NP87 494 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-214ENST00000590556 IPO11Q9UI26 975 aaKnown RBP19.54■□□□□ 0.72
DDX39A-214ENST00000590556 ZNF318Q5VUA4 2279 aa19.54■□□□□ 0.72
DDX39A-214ENST00000590556 NYNRINQ9P2P1 1898 aaKnown RBP19.54■□□□□ 0.72
DDX39A-214ENST00000590556 EDDM13A0A1B0GTR0 161 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 A0A1W2PQF6 199 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 J3KR12 359 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 SMAD6O43541 496 aaKnown RBP19.53■□□□□ 0.72
DDX39A-214ENST00000590556 CST8O60676 142 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 PRAMEF11O60813 436 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 PAPSS2O95340 614 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-214ENST00000590556 COL9A1P20849 921 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 MSNP26038 577 aaKnown RBP19.53■□□□□ 0.72
DDX39A-214ENST00000590556 PTPN7P35236 360 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 SERPINH1P50454 418 aaKnown RBP19.53■□□□□ 0.72
DDX39A-214ENST00000590556 GBE1Q04446 702 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 IL10RBQ08334 325 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 ZNF211Q13398 564 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-214ENST00000590556 ARHGAP36Q6ZRI8 547 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 LRRC49Q8IUZ0 686 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 ATPAF2Q8N5M1 289 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 TSTD1Q8NFU3 115 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 HHIPQ96QV1 700 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 OSBPL8Q9BZF1 889 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 MTG2Q9H4K7 406 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 PRMT8Q9NR22 394 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-214ENST00000590556 HEY1Q9Y5J3 304 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 ACTL7AQ9Y615 435 aa19.53■□□□□ 0.72
DDX39A-214ENST00000590556 TARSL2A2RTX5 802 aaKnown RBP19.52■□□□□ 0.72
DDX39A-214ENST00000590556 ZBTB24O43167 697 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-214ENST00000590556 GALR2O43603 387 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-214ENST00000590556 MAP3K6O95382 1288 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 CD160O95971 181 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 MX2P20592 715 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 CSTF1Q05048 431 aaKnown RBP19.52■□□□□ 0.72
DDX39A-214ENST00000590556 GALNT2Q10471 571 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 SLC10A2Q12908 348 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-214ENST00000590556 CAMK2GQ13555 558 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-214ENST00000590556 DCAF12L1Q5VU92 463 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 KIAA1211LQ6NV74 962 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 AADACL2Q6P093 401 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 NPNTQ6UXI9 565 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 METTL3Q86U44 580 aaKnown RBP19.52■□□□□ 0.72
DDX39A-214ENST00000590556 CAMKK1Q8N5S9 505 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 FRS2Q8WU20 508 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 CASKIN2Q8WXE0 1202 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 TLR10Q9BXR5 811 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 CEP44Q9C0F1 390 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 PRSS16Q9NQE7 514 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 DTLQ9NZJ0 730 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 UBA2Q9UBT2 640 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-214ENST00000590556 EFR3BQ9Y2G0 817 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 JRKLQ9Y4A0 524 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 CKAP5Q14008 2032 aa19.52■□□□□ 0.72
DDX39A-214ENST00000590556 TCRBV21S2A2A0A5A6 115 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 K7ESF4 209 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 SIN3BO75182 1162 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 ALDH1A2O94788 518 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 APBB3O95704 486 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 TGM2P21980 687 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 GARSP41250 739 aaKnown RBP19.51■□□□□ 0.71
DDX39A-214ENST00000590556 NR2C2P49116 596 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 ADCY2Q08462 1091 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 C9orf64Q5T6V5 341 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 CCDC181Q5TID7 509 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 C22orf39Q6P5X5 142 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 BBS12Q6ZW61 710 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 MAML2Q8IZL2 1156 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-214ENST00000590556 SLC35F6Q8N357 371 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 TRIM44Q96DX7 344 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-214ENST00000590556 PDFQ9HBH1 243 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 CD248Q9HCU0 757 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 KCND1Q9NSA2 647 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 FBXO4Q9UKT5 387 aa19.51■□□□□ 0.71
DDX39A-214ENST00000590556 FCF1Q9Y324 198 aaKnown RBP19.51■□□□□ 0.71
DDX39A-214ENST00000590556 KCNK3O14649 394 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 BNIP3LO60238 219 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 MAFKO60675 156 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 TJP3O95049 919 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 VAV1P15498 845 aa19.5■□□□□ 0.71
DDX39A-214ENST00000590556 PDK1Q15118 436 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms