RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 DNAJB1P25685 340 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 NMBRP28336 390 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 MAP2K2P36507 400 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 TUBP50607 506 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 SMAD1Q15797 465 aaKnown RBP19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 POTEHQ6S545 545 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 CMC1Q7Z7K0 106 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 CLEC14AQ86T13 490 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 PPHLN1Q8NEY8 458 aaKnown RBP19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 CCDC106Q9BWC9 280 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 DNAJC28Q9NX36 388 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 TLK1Q9UKI8 766 aa19.5■□□□□ 0.71
PRKCSH-209ENST00000589838 FNDC1Q4ZHG4 1894 aaPredicted RBP19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 B2RBV5 119 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 TMEM114B3SHH9 223 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 E9PAM4 449 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 ENO1P06733 434 aaKnown RBP19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 DSC1Q08554 894 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 NOMO2Q5JPE7 1267 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 AFMIDQ63HM1 303 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 MSANTD2Q6P1R3 559 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 NUP93Q8N1F7 819 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 RTL3Q8N8U3 475 aaKnown RBP19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 RDH11Q8TC12 318 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 VPS39Q96JC1 886 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 C8orf48Q96LL4 319 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 MCMBPQ9BTE3 642 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 RHOJQ9H4E5 214 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 MRM3Q9HC36 420 aaKnown RBP19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 MAGED2Q9UNF1 606 aaPredicted RBP19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 TLR6Q9Y2C9 796 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 CDY1Q9Y6F8 540 aa19.49■□□□□ 0.71
PRKCSH-209ENST00000589838 FRMPD3Q5JV73 1810 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 A0A1W2PQH9 124 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 MAGEC1O60732 1142 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 DIAPH2O60879 1101 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 LYPLA1O75608 230 aaPredicted RBP19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 C2P06681 752 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 PRKAA2P54646 552 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 ALDH18A1P54886 795 aaKnown RBP19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 MLLT6P55198 1093 aaPredicted RBP19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 ACCSLQ4AC99 568 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 DNAL1Q4LDG9 190 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 ARHGAP36Q6ZRI8 547 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 NSMCE1Q8WV22 266 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 ATXN7L3BQ96GX2 97 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 FAM193BQ96PV7 902 aaPredicted RBP19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 GPR22Q99680 433 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 ABI2Q9NYB9 513 aaPredicted RBP19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 MSI1O43347 362 aaKnown RBP19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 ALOX15P16050 662 aaPredicted RBP19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 PAMP19021 973 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 PGM1P36871 562 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 ACLYP53396 1101 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 ITGA9Q13797 1035 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 IPMKQ8NFU5 416 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 OR6Y1Q8NGX8 325 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 SPATA22Q8NHS9 363 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 AZIN2Q96A70 460 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 PGLYRP2Q96PD5 576 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 FICDQ9BVA6 458 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 NMRAL1Q9HBL8 299 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 TBC1D13Q9NVG8 400 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 RBM22Q9NW64 420 aaKnown RBP eCLIP19.48■□□□□ 0.713e-7■■■■□ 21.7
PRKCSH-209ENST00000589838 PCDHB12Q9Y5F1 795 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 HS3ST4Q9Y661 456 aa19.48■□□□□ 0.71
PRKCSH-209ENST00000589838 DDHD2O94830 711 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 TPBGLP0DKB5 382 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 COL6A2P12110 1019 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 CKBP12277 381 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 AOC1P19801 751 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 FAM189BP81408 668 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 ZC3HC1Q86WB0 502 aaKnown RBP19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 TREML1Q86YW5 311 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 COLGALT2Q8IYK4 626 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 FATE1Q969F0 183 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 ZNF778Q96MU6 729 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 SORT1Q99523 831 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 EBF4Q9BQW3 602 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 C1orf21Q9H246 121 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 NMUR1Q9HB89 426 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 SLC39A10Q9ULF5 831 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 PCDHB5Q9Y5E4 795 aa19.47■□□□□ 0.71
PRKCSH-209ENST00000589838 SYN3O14994 580 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 TRIM13O60858 407 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 MOCS2O96007 188 aaPredicted RBP19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 GNAZP19086 355 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 MAGEA11P43364 429 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 OR1G1P47890 313 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 RAP1GDS1P52306 607 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 TLDC1Q6P9B6 456 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 RAPH1Q70E73 1250 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 RTN4RL1Q86UN2 441 aaPredicted RBP19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 ZNF280BQ86YH2 543 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 CNTN4Q8IWV2 1026 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 PLD6Q8N2A8 252 aaKnown RBP19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 GABPB2Q8TAK5 448 aaPredicted RBP19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 FSD1LQ9BXM9 530 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 PRKD2Q9BZL6 878 aa19.46■□□□□ 0.71
PRKCSH-209ENST00000589838 UBE2OQ9C0C9 1292 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms