RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RIOK3O14730 519 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 TPP1O14773 563 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 NKX2-8O15522 239 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 DUX1O43812 170 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 GADD45BO75293 160 aaPredicted RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 PRPF6O94906 941 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 GAP43P17677 238 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 ADORA2BP29275 332 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 PPP1R2P41236 205 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 PSEN1P49768 467 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 STK19P49842 368 aaPredicted RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 ST8SIA6P61647 398 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 CCL7P80098 99 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 ZFP36L1Q07352 338 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 ELAVL3Q14576 367 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 FSCBQ5H9T9 825 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 PIP5KL1Q5T9C9 394 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 CAVIN1Q6NZI2 390 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 CNNM4Q6P4Q7 775 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 RFWD3Q6PCD5 774 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 SASS6Q6UVJ0 657 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 SCARA5Q6ZMJ2 495 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 Q6ZSR6 202 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 SV2AQ7L0J3 742 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 BHLHA9Q7RTU4 235 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 TADA2BQ86TJ2 420 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 HEATR4Q86WZ0 1026 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 RBFAQ8N0V3 343 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 FMR1NBQ8N0W7 255 aaPredicted RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 PDCD6IPQ8WUM4 868 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 ZNF516Q92618 1163 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 CCDC74AQ96AQ1 378 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 PLD4Q96BZ4 506 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 MOCOSQ96EN8 888 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 TMA16Q96EY4 203 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 TNIP3Q96KP6 325 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 BMFQ96LC9 184 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 PRICKLE1Q96MT3 831 aaPredicted RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 GFM1Q96RP9 751 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 EPAS1Q99814 870 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 TCEAL2Q9H3H9 227 aaPredicted RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 CLSTN2Q9H4D0 955 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 PNPLA8Q9NP80 782 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 CASS4Q9NQ75 786 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 TBC1D7Q9P0N9 293 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 SERTAD1Q9UHV2 236 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 ZFR2Q9UPR6 939 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 HPSEQ9Y251 543 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 R3HCC1Q9Y3T6 440 aaKnown RBP6.28□□□□□ -1.4
VPS25-204ENST00000589577 PCDHB11Q9Y5F2 797 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 GOLGA6L7A0A1B0GV03 622 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 A0A1W2PQU0 124 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 A6NNZ2 444 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 STMND1H3BQB6 276 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 RNF103O00237 685 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 RAD51BO15315 384 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 SPINT1O43278 529 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 TBL1XO60907 577 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 PDGFAP04085 211 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 ASLP04424 464 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 RPLP0P05388 317 aaKnown RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 FAM200BP0CF97 657 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 PRKAR1AP10644 381 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 RALAP11233 206 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 HOXB4P17483 251 aaPredicted RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 HNRNPA2B1P22626 353 aaKnown RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 CD82P27701 267 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 OAS2P29728 719 aaKnown RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 NUMBP49757 651 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 NDST1P52848 882 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 MAPK10P53779 464 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 CDC20Q12834 499 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 EIF2B5Q13144 721 aaKnown RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 MRPL49Q13405 166 aaKnown RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 ALCAMQ13740 583 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 FGL2Q14314 439 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 BMT2Q1RMZ1 405 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 EIF2S3LQ2VIR3 472 aaKnown RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 FAM133BQ5BKY9 247 aaKnown RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 PITRM1Q5JRX3 1037 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 MPP7Q5T2T1 576 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 ADGRF1Q5T601 910 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 PIK3R6Q5UE93 754 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 SEL1L3Q68CR1 1132 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 PTAR1Q7Z6K3 402 aaPredicted RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 PARGQ86W56 976 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 ELOA2Q8IYF1 753 aaPredicted RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 CRYBG2Q8N1P7 616 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 SDR16C5Q8N3Y7 309 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 KYQ8NBH2 561 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 FIBINQ8TAL6 211 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 LMX1AQ8TE12 382 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 FRS2Q8WU20 508 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 MARVELD3Q96A59 401 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 RPL10LQ96L21 214 aaKnown RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 CATSPER2Q96P56 530 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 ACCSQ96QU6 501 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 TWNKQ96RR1 684 aa6.27□□□□□ -1.41
VPS25-204ENST00000589577 CDK5RAP1Q96SZ6 601 aaKnown RBP6.27□□□□□ -1.41
VPS25-204ENST00000589577 LRRC61Q9BV99 259 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms