RNA–Protein interactions for RNA: ENST00000588090.5

CIRBP-216, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-216ENST00000588090 SLC39A8Q9C0K1 460 aa23.92■■□□□ 1.42
CIRBP-216ENST00000588090 MT-CO1P00395 513 aa23.91■■□□□ 1.42
CIRBP-216ENST00000588090 NDUFV2P19404 249 aa23.91■■□□□ 1.42
CIRBP-216ENST00000588090 DLG2Q15700 870 aa23.91■■□□□ 1.42
CIRBP-216ENST00000588090 METTL3Q86U44 580 aaKnown RBP23.91■■□□□ 1.42
CIRBP-216ENST00000588090 ERLEC1Q96DZ1 483 aa23.91■■□□□ 1.42
CIRBP-216ENST00000588090 MRGPRX1Q96LB2 322 aa23.91■■□□□ 1.42
CIRBP-216ENST00000588090 CEP44Q9C0F1 390 aa23.91■■□□□ 1.42
CIRBP-216ENST00000588090 ETNK2Q9NVF9 386 aa23.91■■□□□ 1.42
CIRBP-216ENST00000588090 SIN3BO75182 1162 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 CNR2P34972 360 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 COPAP53621 1224 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 C9orf64Q5T6V5 341 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 TMPRSS6Q8IU80 811 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 ARHGAP12Q8IWW6 846 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 KATNAL2Q8IYT4 538 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 PCDH19Q8TAB3 1148 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 CASKIN2Q8WXE0 1202 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 PTPRN2Q92932 1015 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 CCDC114Q96M63 670 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 MKRN2Q9H000 416 aaKnown RBP23.9■■□□□ 1.42
CIRBP-216ENST00000588090 MTG2Q9H4K7 406 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 PRDM16Q9HAZ2 1276 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 GUCA1BQ9UMX6 200 aa23.9■■□□□ 1.42
CIRBP-216ENST00000588090 CCDC66A2RUB6 948 aa23.89■■□□□ 1.42
CIRBP-216ENST00000588090 DFFAO00273 331 aa23.89■■□□□ 1.42
CIRBP-216ENST00000588090 PALMO75781 387 aa23.89■■□□□ 1.42
CIRBP-216ENST00000588090 CTNNA1P35221 906 aaKnown RBP23.89■■□□□ 1.42
CIRBP-216ENST00000588090 PAPOLAP51003 745 aaKnown RBP23.89■■□□□ 1.42
CIRBP-216ENST00000588090 CCDC173Q0VFZ6 552 aa23.89■■□□□ 1.42
CIRBP-216ENST00000588090 ELAVL3Q14576 367 aaKnown RBP23.89■■□□□ 1.42
CIRBP-216ENST00000588090 RNF157Q96PX1 679 aa23.89■■□□□ 1.42
CIRBP-216ENST00000588090 TPSD1Q9BZJ3 242 aa23.89■■□□□ 1.42
CIRBP-216ENST00000588090 PPP2R2CQ9Y2T4 447 aa23.89■■□□□ 1.42
CIRBP-216ENST00000588090 PLXND1Q9Y4D7 1925 aa23.89■■□□□ 1.42
CIRBP-216ENST00000588090 C3orf70A6NLC5 250 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-216ENST00000588090 K7ERQ8 282 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 RNASEH1O60930 286 aaKnown RBP23.88■■□□□ 1.41
CIRBP-216ENST00000588090 LILRB5O75023 590 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 C7P10643 843 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 PAFAH1B3Q15102 231 aaKnown RBP23.88■■□□□ 1.41
CIRBP-216ENST00000588090 USP39Q53GS9 565 aaKnown RBP23.88■■□□□ 1.41
CIRBP-216ENST00000588090 INO80DQ53TQ3 878 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-216ENST00000588090 NCBP2-AS2Q69YL0 99 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 C22orf39Q6P5X5 142 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 PEX26Q7Z412 305 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-216ENST00000588090 PRCCQ92733 491 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-216ENST00000588090 RNF25Q96BH1 459 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-216ENST00000588090 SIPA1Q96FS4 1042 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 MAK16Q9BXY0 300 aaKnown RBP23.88■■□□□ 1.41
CIRBP-216ENST00000588090 AMFRQ9UKV5 643 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 MFHAS1Q9Y4C4 1052 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 PCDHA3Q9Y5H8 950 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 CAPN6Q9Y6Q1 641 aa23.88■■□□□ 1.41
CIRBP-216ENST00000588090 SMAD6O43541 496 aaKnown RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 PRAMEF11O60813 436 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 ZNF217O75362 1048 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 ZRANB2O95218 330 aaKnown RBP eCLIP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 CD160O95971 181 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 CTNNA2P26232 953 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 BYSLQ13895 437 aaKnown RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 KIAA1324Q6UXG2 1013 aaKnown RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 Q6ZVU0 165 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 NT5DC3Q86UY8 548 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 PCDH20Q8N6Y1 951 aaKnown RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 EXD1Q8NHP7 514 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 UBE2Q2Q8WVN8 375 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 KRT35Q92764 455 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 ISG20Q96AZ6 181 aaKnown RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 RBM41Q96IZ5 413 aaKnown RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 RSPH9Q9H1X1 276 aaPredicted RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 KCNF1Q9H3M0 494 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 SP110Q9HB58 689 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 LZTFL1Q9NQ48 299 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 FARP1Q9Y4F1 1045 aaPredicted RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 ALOX15BO15296 676 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 VAV1P15498 845 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 MARCKSL1P49006 195 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 ZBTB16Q05516 673 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 ZNF776Q68DI1 518 aaPredicted RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 DSG4Q86SJ6 1040 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 LRRC49Q8IUZ0 686 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 RCOR2Q8IZ40 523 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 PQLC3Q8N755 202 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 GAB3Q8WWW8 586 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 OR8D1Q8WZ84 308 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 SPACA7Q96KW9 195 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 SLC6A17Q9H1V8 727 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 PDFQ9HBH1 243 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 UBA2Q9UBT2 640 aaPredicted RBP23.87■■□□□ 1.41
CIRBP-216ENST00000588090 RAPGEFL1Q9UHV5 662 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 R4GN57 208 aa23.87■■□□□ 1.41
CIRBP-216ENST00000588090 MIF4GDA9UHW6 222 aaKnown RBP23.86■■□□□ 1.41
CIRBP-216ENST00000588090 MFSD11O43934 449 aa23.86■■□□□ 1.41
CIRBP-216ENST00000588090 RPP40O75818 363 aaKnown RBP23.86■■□□□ 1.41
CIRBP-216ENST00000588090 ACADMP11310 421 aa23.86■■□□□ 1.41
CIRBP-216ENST00000588090 ZFXP17010 805 aaPredicted RBP23.86■■□□□ 1.41
CIRBP-216ENST00000588090 NBL1P41271 181 aa23.86■■□□□ 1.41
CIRBP-216ENST00000588090 CDKN2BP42772 138 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms