RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 SPON2Q9BUD6 331 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 C2orf49Q9BVC5 232 aaPredicted RBP14.69□□□□□ -0.06
VMP1-206ENST00000587945 TNKS2Q9H2K2 1166 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 KDM4CQ9H3R0 1056 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 NLRC4Q9NPP4 1024 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 METTL5Q9NRN9 209 aaKnown RBP14.69□□□□□ -0.06
VMP1-206ENST00000587945 FAM207AQ9NSI2 230 aaPredicted RBP14.69□□□□□ -0.06
VMP1-206ENST00000587945 FTSJ1Q9UET6 329 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 NOCTQ9UK39 431 aaKnown RBP14.69□□□□□ -0.06
VMP1-206ENST00000587945 PAXBP1Q9Y5B6 917 aa14.69□□□□□ -0.06
VMP1-206ENST00000587945 CHD6Q8TD26 2715 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 IGLV3-10A0A075B6K4 115 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 KPNA3O00505 521 aaPredicted RBP14.68□□□□□ -0.06
VMP1-206ENST00000587945 ALOX15BO15296 676 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 OR1E1P30953 314 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 CHRNA3P32297 505 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 FMO1Q01740 532 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 BNIP3Q12983 259 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 INAVAQ3KP66 663 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 C6orf118Q5T5N4 469 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 PIP5KL1Q5T9C9 394 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 CDKAL1Q5VV42 579 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 DHRS13Q6UX07 377 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 SETD3Q86TU7 594 aaPredicted RBP14.68□□□□□ -0.06
VMP1-206ENST00000587945 PROSER1Q86XN7 944 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 EID2Q8N6I1 236 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 DCAF4L2Q8NA75 395 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 MSANTD4Q8NCY6 345 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 SLC30A5Q8TAD4 765 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 ARRDC3Q96B67 414 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 HAPLN3Q96S86 360 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 MYOCQ99972 504 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 ZNF212Q9UDV6 495 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 TPX2Q9ULW0 747 aaKnown RBP14.68□□□□□ -0.06
VMP1-206ENST00000587945 CABIN1Q9Y6J0 2220 aa14.68□□□□□ -0.06
VMP1-206ENST00000587945 FREM2Q5SZK8 3169 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 SLC31A1O15431 190 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 RNGTTO60942 597 aaKnown RBP14.67□□□□□ -0.06
VMP1-206ENST00000587945 CYP1A1P04798 512 aaPredicted RBP14.67□□□□□ -0.06
VMP1-206ENST00000587945 PRLRP16471 622 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 EPHA8P29322 1005 aaPredicted RBP14.67□□□□□ -0.06
VMP1-206ENST00000587945 SOX5P35711 763 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 CLDN6P56747 220 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 CDR2Q01850 454 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 DNAJC3Q13217 504 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 STAT4Q14765 748 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 CDO1Q16878 200 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 C15orf59Q2T9L4 293 aaPredicted RBP14.67□□□□□ -0.06
VMP1-206ENST00000587945 SLC45A4Q5BKX6 768 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 ARSIQ5FYB1 569 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 C22orf39Q6P5X5 142 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 TRIM69Q86WT6 500 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 DRC7Q8IY82 874 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 MFSD2AQ8NA29 543 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 GRIN3AQ8TCU5 1115 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 GPT2Q8TD30 523 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 RXFP2Q8WXD0 754 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 CNDP2Q96KP4 475 aaKnown RBP14.67□□□□□ -0.06
VMP1-206ENST00000587945 C11orf70Q9BRQ4 267 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 MAGEB5Q9BZ81 275 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 CCDC86Q9H6F5 360 aaKnown RBP14.67□□□□□ -0.06
VMP1-206ENST00000587945 FANCLQ9NW38 375 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
VMP1-206ENST00000587945 ACTL7AQ9Y615 435 aa14.67□□□□□ -0.06
VMP1-206ENST00000587945 A0A1W2PQU0 124 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 ILVBLA1L0T0 632 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 ENC1O14682 589 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 ZNF821O75541 412 aaPredicted RBP14.66□□□□□ -0.06
VMP1-206ENST00000587945 ZMPSTE24O75844 475 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 LDOC1O95751 146 aaPredicted RBP14.66□□□□□ -0.06
VMP1-206ENST00000587945 MMP8P22894 467 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 ARRB1P49407 418 aaPredicted RBP14.66□□□□□ -0.06
VMP1-206ENST00000587945 CLCN6P51797 869 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 JAM2P57087 298 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 CCDC14Q49A88 953 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 SETMARQ53H47 684 aaPredicted RBP14.66□□□□□ -0.06
VMP1-206ENST00000587945 FKBP15Q5T1M5 1219 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 DPY19L3Q6ZPD9 716 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 CLEC17AQ6ZS10 378 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 ZNF677Q86XU0 584 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 TMIEQ8NEW7 156 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 JOSD2Q8TAC2 188 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 CCDC114Q96M63 670 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 PCDHB18PQ96TA0 734 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 ZYG11BQ9C0D3 744 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 CAAP1Q9H8G2 361 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 PREBQ9HCU5 417 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 ATP13A1Q9HD20 1204 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 FZD3Q9NPG1 666 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 DMTF1Q9Y222 760 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 SIK3Q9Y2K2 1263 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 DMXL2Q8TDJ6 3036 aa14.66□□□□□ -0.06
VMP1-206ENST00000587945 TRABD2BA6NFA1 517 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 FAM72CH0Y354 149 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 PRAMEF26H0Y7S4 382 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 SDC3O75056 442 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 LEFTY1O75610 366 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 PRNPP04156 253 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 NUDT1P36639 197 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 ACVRL1P37023 503 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms