RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 KIF26BQ2KJY2 2108 aa8.8□□□□□ -1
SDF2-204ENST00000587338 A0A1W2PQU0 124 aa8.8□□□□□ -1
SDF2-204ENST00000587338 SUV39H1O43463 412 aa8.8□□□□□ -1
SDF2-204ENST00000587338 CALUO43852 315 aaPredicted RBP8.8□□□□□ -1
SDF2-204ENST00000587338 BNIP3LO60238 219 aa8.8□□□□□ -1
SDF2-204ENST00000587338 RHOBTB3O94955 611 aa8.8□□□□□ -1
SDF2-204ENST00000587338 PDGFRAP16234 1089 aa8.8□□□□□ -1
SDF2-204ENST00000587338 ZNF18P17022 549 aa8.8□□□□□ -1
SDF2-204ENST00000587338 BMP6P22004 513 aa8.8□□□□□ -1
SDF2-204ENST00000587338 NR2F2P24468 414 aa8.8□□□□□ -1
SDF2-204ENST00000587338 AKT2P31751 481 aa8.8□□□□□ -1
SDF2-204ENST00000587338 RGS7P49802 495 aa8.8□□□□□ -1
SDF2-204ENST00000587338 STX17P56962 302 aa8.8□□□□□ -1
SDF2-204ENST00000587338 CLDN2P57739 230 aa8.8□□□□□ -1
SDF2-204ENST00000587338 DRAP1Q14919 205 aaPredicted RBP8.8□□□□□ -1
SDF2-204ENST00000587338 ACCSLQ4AC99 568 aa8.8□□□□□ -1
SDF2-204ENST00000587338 MS4A13Q5J8X5 152 aa8.8□□□□□ -1
SDF2-204ENST00000587338 OR6B2Q6IFH4 312 aa8.8□□□□□ -1
SDF2-204ENST00000587338 ZCCHC8Q6NZY4 707 aaKnown RBP8.8□□□□□ -1
SDF2-204ENST00000587338 INTS8Q75QN2 995 aaKnown RBP8.8□□□□□ -1
SDF2-204ENST00000587338 EFL1Q7Z2Z2 1120 aaKnown RBP8.8□□□□□ -1
SDF2-204ENST00000587338 PTAR1Q7Z6K3 402 aaPredicted RBP8.8□□□□□ -1
SDF2-204ENST00000587338 CLEC14AQ86T13 490 aa8.8□□□□□ -1
SDF2-204ENST00000587338 FAM186BQ8IYM0 893 aa8.8□□□□□ -1
SDF2-204ENST00000587338 LGI2Q8N0V4 545 aa8.8□□□□□ -1
SDF2-204ENST00000587338 ZNF548Q8NEK5 533 aaPredicted RBP8.8□□□□□ -1
SDF2-204ENST00000587338 TMEM174Q8WUU8 243 aa8.8□□□□□ -1
SDF2-204ENST00000587338 ANP32BQ92688 251 aaKnown RBP8.8□□□□□ -1
SDF2-204ENST00000587338 SEMA4DQ92854 862 aa8.8□□□□□ -1
SDF2-204ENST00000587338 AZIN2Q96A70 460 aa8.8□□□□□ -1
SDF2-204ENST00000587338 GRAMD1AQ96CP6 724 aa8.8□□□□□ -1
SDF2-204ENST00000587338 PRR11Q96HE9 360 aaPredicted RBP8.8□□□□□ -1
SDF2-204ENST00000587338 FCRL2Q96LA5 508 aaPredicted RBP8.8□□□□□ -1
SDF2-204ENST00000587338 NOX5Q96PH1 765 aa8.8□□□□□ -1
SDF2-204ENST00000587338 DUSP23Q9BVJ7 150 aa8.8□□□□□ -1
SDF2-204ENST00000587338 TMEM8AQ9HCN3 771 aa8.8□□□□□ -1
SDF2-204ENST00000587338 XPO7Q9UIA9 1087 aaKnown RBP8.8□□□□□ -1
SDF2-204ENST00000587338 ATXN7L1Q9ULK2 861 aaPredicted RBP8.8□□□□□ -1
SDF2-204ENST00000587338 CENPEQ02224 2701 aa8.79□□□□□ -1
SDF2-204ENST00000587338 MUSKO15146 869 aa8.79□□□□□ -1
SDF2-204ENST00000587338 EFSO43281 561 aa8.79□□□□□ -1
SDF2-204ENST00000587338 GJB6O95452 261 aa8.79□□□□□ -1
SDF2-204ENST00000587338 LTFP02788 710 aa8.79□□□□□ -1
SDF2-204ENST00000587338 ITGA2BP08514 1039 aa8.79□□□□□ -1
SDF2-204ENST00000587338 SETSIPP0DME0 302 aa8.79□□□□□ -1
SDF2-204ENST00000587338 CD44P16070 742 aaKnown RBP8.79□□□□□ -1
SDF2-204ENST00000587338 HNRNPA2B1P22626 353 aaKnown RBP8.79□□□□□ -1
SDF2-204ENST00000587338 PRCPP42785 496 aa8.79□□□□□ -1
SDF2-204ENST00000587338 MXI1P50539 228 aa8.79□□□□□ -1
SDF2-204ENST00000587338 TAS2R38P59533 333 aa8.79□□□□□ -1
SDF2-204ENST00000587338 HNRNPKP61978 463 aaKnown RBP eCLIP8.79□□□□□ -1
SDF2-204ENST00000587338 TLE1Q04724 770 aa8.79□□□□□ -1
SDF2-204ENST00000587338 SRSF6Q13247 344 aaKnown RBP8.79□□□□□ -1
SDF2-204ENST00000587338 ZNF284Q2VY69 593 aa8.79□□□□□ -1
SDF2-204ENST00000587338 DEFB133Q30KQ1 61 aa8.79□□□□□ -1
SDF2-204ENST00000587338 RAP1GAP2Q684P5 730 aa8.79□□□□□ -1
SDF2-204ENST00000587338 KRT39Q6A163 491 aa8.79□□□□□ -1
SDF2-204ENST00000587338 GCNT7Q6ZNI0 430 aa8.79□□□□□ -1
SDF2-204ENST00000587338 Q6ZSR6 202 aa8.79□□□□□ -1
SDF2-204ENST00000587338 Q6ZVU0 165 aa8.79□□□□□ -1
SDF2-204ENST00000587338 CHSY1Q86X52 802 aa8.79□□□□□ -1
SDF2-204ENST00000587338 CIR1Q86X95 450 aaPredicted RBP8.79□□□□□ -1
SDF2-204ENST00000587338 JAMLQ86YT9 394 aa8.79□□□□□ -1
SDF2-204ENST00000587338 CREBRFQ8IUR6 639 aa8.79□□□□□ -1
SDF2-204ENST00000587338 SLC22A18ASQ8N1D0 253 aa8.79□□□□□ -1
SDF2-204ENST00000587338 SCML4Q8N228 414 aa8.79□□□□□ -1
SDF2-204ENST00000587338 WDR36Q8NI36 951 aaKnown RBP8.79□□□□□ -1
SDF2-204ENST00000587338 DQX1Q8TE96 717 aaKnown RBP8.79□□□□□ -1
SDF2-204ENST00000587338 CLEC4CQ8WTT0 213 aa8.79□□□□□ -1
SDF2-204ENST00000587338 FRS2Q8WU20 508 aa8.79□□□□□ -1
SDF2-204ENST00000587338 NELFBQ8WX92 580 aa8.79□□□□□ -1
SDF2-204ENST00000587338 KCTD13Q8WZ19 329 aa8.79□□□□□ -1
SDF2-204ENST00000587338 SGF29Q96ES7 293 aa8.79□□□□□ -1
SDF2-204ENST00000587338 SERPINB11Q96P15 392 aa8.79□□□□□ -1
SDF2-204ENST00000587338 GTPBP4Q9BZE4 634 aaKnown RBP8.79□□□□□ -1
SDF2-204ENST00000587338 NCKIPSDQ9NZQ3 722 aa8.79□□□□□ -1
SDF2-204ENST00000587338 SEPT3Q9UH03 358 aa8.79□□□□□ -1
SDF2-204ENST00000587338 PPM1HQ9ULR3 514 aa8.79□□□□□ -1
SDF2-204ENST00000587338 TLR6Q9Y2C9 796 aa8.79□□□□□ -1
SDF2-204ENST00000587338 RP1P56715 2156 aa8.79□□□□□ -1
SDF2-204ENST00000587338 CREBBPQ92793 2442 aa8.78□□□□□ -1
SDF2-204ENST00000587338 CCDC187A0A096LP49 1063 aa8.78□□□□□ -1
SDF2-204ENST00000587338 A6NNZ2 444 aa8.78□□□□□ -1
SDF2-204ENST00000587338 PPP1R3GB7ZBB8 358 aa8.78□□□□□ -1
SDF2-204ENST00000587338 H3BM21 787 aa8.78□□□□□ -1
SDF2-204ENST00000587338 O00370 1275 aa8.78□□□□□ -1
SDF2-204ENST00000587338 KPNA3O00505 521 aaPredicted RBP8.78□□□□□ -1
SDF2-204ENST00000587338 PSMA7O14818 248 aa8.78□□□□□ -1
SDF2-204ENST00000587338 CASC3O15234 703 aaKnown RBP8.78□□□□□ -1
SDF2-204ENST00000587338 MAPK13O15264 365 aa8.78□□□□□ -1
SDF2-204ENST00000587338 ALOX15BO15296 676 aa8.78□□□□□ -1
SDF2-204ENST00000587338 TCEA3O75764 348 aa8.78□□□□□ -1
SDF2-204ENST00000587338 APOEP02649 317 aa8.78□□□□□ -1
SDF2-204ENST00000587338 AFPP02771 609 aaKnown RBP8.78□□□□□ -1
SDF2-204ENST00000587338 ITGB2P05107 769 aa8.78□□□□□ -1
SDF2-204ENST00000587338 GP1BBP13224 206 aa8.78□□□□□ -1
SDF2-204ENST00000587338 ITGB6P18564 788 aa8.78□□□□□ -1
SDF2-204ENST00000587338 CDK11BP21127 795 aaKnown RBP8.78□□□□□ -1
SDF2-204ENST00000587338 TACR2P21452 398 aa8.78□□□□□ -1
SDF2-204ENST00000587338 PPP1R2P41236 205 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms