RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 CALR3Q96L12 384 aaKnown RBP21.91■■□□□ 1.1
RETREG3-204ENST00000586796 RCOR3Q9P2K3 495 aaPredicted RBP21.91■■□□□ 1.1
RETREG3-204ENST00000586796 TARSL2A2RTX5 802 aaKnown RBP21.9■■□□□ 1.1
RETREG3-204ENST00000586796 ARHGAP42A6NI28 874 aa21.9■■□□□ 1.1
RETREG3-204ENST00000586796 RPP40O75818 363 aaKnown RBP21.9■■□□□ 1.1
RETREG3-204ENST00000586796 SERPINH1P50454 418 aaKnown RBP21.9■■□□□ 1.1
RETREG3-204ENST00000586796 DNA2P51530 1060 aa21.9■■□□□ 1.1
RETREG3-204ENST00000586796 IFI16Q16666 785 aaKnown RBP21.9■■□□□ 1.1
RETREG3-204ENST00000586796 LRRC38Q5VT99 294 aa21.9■■□□□ 1.1
RETREG3-204ENST00000586796 KIAA1524Q8TCG1 905 aa21.9■■□□□ 1.1
RETREG3-204ENST00000586796 SIPA1Q96FS4 1042 aa21.9■■□□□ 1.1
RETREG3-204ENST00000586796 ZNF830Q96NB3 372 aaPredicted RBP21.9■■□□□ 1.1
RETREG3-204ENST00000586796 PHOX2BQ99453 314 aa21.9■■□□□ 1.1
RETREG3-204ENST00000586796 ZNF670Q9BS34 389 aa21.9■■□□□ 1.1
RETREG3-204ENST00000586796 TNKS2Q9H2K2 1166 aa21.9■■□□□ 1.1
RETREG3-204ENST00000586796 DDX56Q9NY93 547 aaKnown RBP21.9■■□□□ 1.1
RETREG3-204ENST00000586796 FCF1Q9Y324 198 aaKnown RBP21.9■■□□□ 1.1
RETREG3-204ENST00000586796 GRID2IPA4D2P6 1211 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 PSTPIP1O43586 416 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 LILRB5O75023 590 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 CCDC175P0C221 793 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 ACADMP11310 421 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 VASPP50552 380 aaPredicted RBP21.89■■□□□ 1.09
RETREG3-204ENST00000586796 SLC20A2Q08357 652 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 PRR23BQ6ZRT6 265 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 CEP68Q76N32 757 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 ARHGAP12Q8IWW6 846 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 LZTR1Q8N653 840 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 FRMD1Q8N878 549 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 PCDH19Q8TAB3 1148 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 TSGA10Q9BZW7 698 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 CD93Q9NPY3 652 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 GUCA1BQ9UMX6 200 aa21.89■■□□□ 1.09
RETREG3-204ENST00000586796 J3KR12 359 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 PALMO75781 387 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 CD160O95971 181 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 MARCKSL1P49006 195 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 CLCN6P51797 869 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 GEMIN4P57678 1058 aaKnown RBP21.88■■□□□ 1.09
RETREG3-204ENST00000586796 RPS14P62263 151 aaKnown RBP21.88■■□□□ 1.09
RETREG3-204ENST00000586796 SIM2Q14190 667 aaPredicted RBP21.88■■□□□ 1.09
RETREG3-204ENST00000586796 AFMIDQ63HM1 303 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 C22orf39Q6P5X5 142 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 ARHGAP36Q6ZRI8 547 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 MMAAQ8IVH4 418 aaKnown RBP21.88■■□□□ 1.09
RETREG3-204ENST00000586796 FAM160A2Q8N612 972 aaPredicted RBP21.88■■□□□ 1.09
RETREG3-204ENST00000586796 GAB3Q8WWW8 586 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 KRT35Q92764 455 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 MAK16Q9BXY0 300 aaKnown RBP21.88■■□□□ 1.09
RETREG3-204ENST00000586796 CYP8B1Q9UNU6 501 aa21.88■■□□□ 1.09
RETREG3-204ENST00000586796 ARIH1Q9Y4X5 557 aaPredicted RBP21.88■■□□□ 1.09
RETREG3-204ENST00000586796 C3orf70A6NLC5 250 aaPredicted RBP21.87■■□□□ 1.09
RETREG3-204ENST00000586796 KRT86O43790 486 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 RNASEH1O60930 286 aaKnown RBP21.87■■□□□ 1.09
RETREG3-204ENST00000586796 DNTTP04053 509 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 CNR2P34972 360 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 SERPINB6P35237 376 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 NBL1P41271 181 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 PSMD8P48556 350 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 LLGL1Q15334 1064 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 LPAL2Q16609 132 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 ZNF776Q68DI1 518 aaPredicted RBP21.87■■□□□ 1.09
RETREG3-204ENST00000586796 NCBP2-AS2Q69YL0 99 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 RFX6Q8HWS3 928 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.87■■□□□ 1.09
RETREG3-204ENST00000586796 SPACA7Q96KW9 195 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 RNF157Q96PX1 679 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 TM6SF2Q9BZW4 377 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 RSPH9Q9H1X1 276 aaPredicted RBP21.87■■□□□ 1.09
RETREG3-204ENST00000586796 FBRSQ9HAH7 460 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 SP110Q9HB58 689 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 LZTFL1Q9NQ48 299 aa21.87■■□□□ 1.09
RETREG3-204ENST00000586796 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.87■■□□□ 1.09
RETREG3-204ENST00000586796 ZSCAN5CA6NGD5 496 aaPredicted RBP21.86■■□□□ 1.09
RETREG3-204ENST00000586796 MAP3K6O95382 1288 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 IL1BP01584 269 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 RECQLP46063 649 aaPredicted RBP21.86■■□□□ 1.09
RETREG3-204ENST00000586796 ELAVL3Q14576 367 aaKnown RBP21.86■■□□□ 1.09
RETREG3-204ENST00000586796 MAP7D1Q3KQU3 841 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 MFSD7Q6UXD7 560 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 FAM124AQ86V42 546 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 CCDC50Q8IVM0 306 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 RYBPQ8N488 228 aaPredicted RBP21.86■■□□□ 1.09
RETREG3-204ENST00000586796 PQLC3Q8N755 202 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 LRRC57Q8N9N7 239 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 GANCQ8TET4 914 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 OR8D1Q8WZ84 308 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 FAF2Q96CS3 445 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 PDLIM2Q96JY6 352 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 CCDC114Q96M63 670 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 FAM129BQ96TA1 746 aa21.86■■□□□ 1.09
RETREG3-204ENST00000586796 UBA2Q9UBT2 640 aaPredicted RBP21.86■■□□□ 1.09
RETREG3-204ENST00000586796 IPO11Q9UI26 975 aaKnown RBP21.86■■□□□ 1.09
RETREG3-204ENST00000586796 FARP1Q9Y4F1 1045 aaPredicted RBP21.86■■□□□ 1.09
RETREG3-204ENST00000586796 MAP3K13O43283 966 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 MFSD11O43934 449 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 PRAMEF11O60813 436 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 ZNF217O75362 1048 aa21.85■■□□□ 1.09
RETREG3-204ENST00000586796 ZNF821O75541 412 aaPredicted RBP21.85■■□□□ 1.09
RETREG3-204ENST00000586796 TMCC1O94876 653 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms