RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CCDC40Q4G0X9 1142 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 TMEM259Q4ZIN3 620 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 ALFQ53S48 1182 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF542PQ5EBM4 170 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 RABGAP1LQ5R372 815 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 TMC6Q7Z403 805 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 ABI3BPQ7Z7G0 1075 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 HORMAD1Q86X24 394 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 SMARCE1Q969G3 411 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 DHTKD1Q96HY7 919 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-225ENST00000586385 APOLD1Q96LR9 279 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 RPRD1AQ96P16 312 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-225ENST00000586385 MED15Q96RN5 788 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 LGMNQ99538 433 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 TRIM62Q9BVG3 475 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 COX16Q9P0S2 106 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 VPS28Q9UK41 221 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 SNX10Q9Y5X0 201 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 TENM4Q6N022 2769 aa12.19□□□□□ -0.46
BRCA1-225ENST00000586385 PMS2P1A4D2B8 440 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 K7ESM1 405 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 PSMA7O14818 248 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 RAD51BO15315 384 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 LZTS3O60299 673 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-225ENST00000586385 CSO75390 466 aaKnown RBP12.18□□□□□ -0.46
BRCA1-225ENST00000586385 PAGE1O75459 146 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 RRM1P23921 792 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 CCR1P32246 355 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 CHRNA3P32297 505 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 OXCT1P55809 520 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 MARSP56192 900 aaKnown RBP12.18□□□□□ -0.46
BRCA1-225ENST00000586385 GABREP78334 506 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 DAB2P98082 770 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 CDK17Q00537 523 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 TPRG1LQ5T0D9 272 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 KLHL10Q6JEL2 608 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 OLFML1Q6UWY5 402 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF605Q86T29 641 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF248Q8NDW4 579 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 NELFBQ8WX92 580 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 TTC9Q92623 222 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 VOPP1Q96AW1 172 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 BMFQ96LC9 184 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF578Q96N58 590 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-225ENST00000586385 CALN1Q9BXU9 219 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 UBE2TQ9NPD8 197 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-225ENST00000586385 ASNSD1Q9NWL6 643 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 NLGN3Q9NZ94 848 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 VPS51Q9UID3 782 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 KLF15Q9UIH9 416 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 SLC25A13Q9UJS0 675 aa12.18□□□□□ -0.46
BRCA1-225ENST00000586385 COL27A1Q8IZC6 1860 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-225ENST00000586385 A0A0D9SEW6 157 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 POM121BA6NF01 834 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 ERVH48-1M5A8F1 160 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 SCAMP1O15126 338 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 THAP12O43422 761 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 USP12O75317 370 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 CLDN11O75508 207 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 SMC2O95347 1197 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 ADCY5O95622 1261 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 ERBB2P04626 1255 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 GLI1P08151 1106 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 SLC2A3P11169 496 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF18P17022 549 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 HNRNPA2B1P22626 353 aaKnown RBP12.17□□□□□ -0.46
BRCA1-225ENST00000586385 GNA15P30679 374 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 LSSP48449 732 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 PCBP4P57723 403 aaKnown RBP12.17□□□□□ -0.46
BRCA1-225ENST00000586385 SKOR1P84550 965 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 NME3Q13232 169 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF177Q13360 481 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-225ENST00000586385 FZD2Q14332 565 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 OR6B2Q6IFH4 312 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 NEK5Q6P3R8 708 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 FOXR2Q6PJQ5 311 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 LINGO4Q6UY18 593 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 FAM183BPQ6ZVS7 135 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 FAM181AQ8N9Y4 354 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 TMIEQ8NEW7 156 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 PRR11Q96HE9 360 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-225ENST00000586385 GTPBP4Q9BZE4 634 aaKnown RBP12.17□□□□□ -0.46
BRCA1-225ENST00000586385 POLR1BQ9H9Y6 1135 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 TMPRSS4Q9NRS4 437 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 PIGVQ9NUD9 493 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 ZNF212Q9UDV6 495 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 SLC12A6Q9UHW9 1150 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 AJAP1Q9UKB5 411 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-225ENST00000586385 WASF2Q9Y6W5 498 aa12.17□□□□□ -0.46
BRCA1-225ENST00000586385 KPNA3O00505 521 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-225ENST00000586385 MED7O43513 233 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 HSF2BPO75031 334 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 ZMPSTE24O75844 475 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 AFPP02771 609 aaKnown RBP12.16□□□□□ -0.46
BRCA1-225ENST00000586385 GP1BAP07359 652 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 TGM2P21980 687 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 AKT2P31751 481 aa12.16□□□□□ -0.46
BRCA1-225ENST00000586385 CDH4P55283 916 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms