RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CAPS2Q9BXY5 557 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 ACSS3Q9H6R3 686 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 DZANK1Q9NVP4 752 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 HAUS2Q9NVX0 235 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 SEPT10Q9P0V9 454 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 LIMD1Q9UGP4 676 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 NEU3Q9UQ49 428 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 AAR2Q9Y312 384 aaKnown RBP10.62□□□□□ -0.71
LIG3-203ENST00000585370 INSL5Q9Y5Q6 135 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 SNX10Q9Y5X0 201 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.62□□□□□ -0.71
LIG3-203ENST00000585370 MAGEB16A2A368 324 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 F5H5T6 163 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 TEX28O15482 410 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 CACNG3O60359 315 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 ACSL4O60488 711 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 SHOX2O60902 331 aaPredicted RBP10.61□□□□□ -0.71
LIG3-203ENST00000585370 ANXA9O76027 345 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 SUN1O94901 812 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 TBX18O95935 607 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 CNPP09543 421 aaKnown RBP10.61□□□□□ -0.71
LIG3-203ENST00000585370 CCNB1P14635 433 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 ELK3P41970 407 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 NPY2RP49146 381 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 RENBPP51606 427 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 CLCN4P51793 760 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 NRLP54845 237 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 GPX6P59796 221 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 TWF1Q12792 350 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 LONRF1Q17RB8 773 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 PARP15Q460N3 678 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 MSS51Q4VC12 460 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 RABGAP1LQ5R372 815 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 ARTNQ5T4W7 220 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 LGSNQ5TDP6 509 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 TMCO4Q5TGY1 634 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 FBXL22Q6P050 247 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 ZNF449Q6P9G9 518 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 TMC5Q6UXY8 1006 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 C14orf80Q86SX3 495 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 LINC00523Q86TU6 105 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 ARHGAP12Q8IWW6 846 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 KLHDC8BQ8IXV7 354 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 UBALD2Q8IYN6 164 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 ELMOD1Q8N336 334 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 NPWQ8N729 165 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 UHMK1Q8TAS1 419 aaKnown RBP10.61□□□□□ -0.71
LIG3-203ENST00000585370 EPS8L3Q8TE67 593 aaKnown RBP10.61□□□□□ -0.71
LIG3-203ENST00000585370 NSMCE1Q8WV22 266 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 CENPTQ96BT3 561 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 KLHL5Q96PQ7 755 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 IL12RB2Q99665 862 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 EBNA1BP2Q99848 306 aaKnown RBP10.61□□□□□ -0.71
LIG3-203ENST00000585370 SLC39A8Q9C0K1 460 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 GBA3Q9H227 469 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 CCSER2Q9H7U1 834 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 RSPH14Q9UHP6 348 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 RABGEF1Q9UJ41 708 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 VANGL2Q9ULK5 521 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 SORCS3Q9UPU3 1222 aa10.61□□□□□ -0.71
LIG3-203ENST00000585370 KCNK1O00180 336 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 DFFAO00273 331 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 COCHO43405 550 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 MAFKO60675 156 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 NEBLO76041 1014 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 FGF19O95750 216 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 AP2A1O95782 977 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 CPP00450 1065 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 OAS1P00973 400 aaKnown RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 JCHAINP01591 159 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 TACR2P21452 398 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 MDH1P40925 334 aaKnown RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 MSH2P43246 934 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 GYS2P54840 703 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 GEMP55040 296 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 TNK2Q07912 1038 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 HNRNPDQ14103 355 aaKnown RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 FASTKD3Q14CZ7 662 aaKnown RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 TTC39BQ5VTQ0 682 aaPredicted RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 NAPEPLDQ6IQ20 393 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 LILRA6Q6PI73 481 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 CHSY1Q86X52 802 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 ANKMY2Q8IV38 441 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 TAB3Q8N5C8 712 aaPredicted RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 SH2D3CQ8N5H7 860 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 PDCD7Q8N8D1 485 aaKnown RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 TDRD5Q8NAT2 981 aaKnown RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 MAML1Q92585 1016 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 ARHGEF2Q92974 986 aaKnown RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 CELF6Q96J87 481 aaKnown RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 SIGLEC10Q96LC7 697 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 RPRD1AQ96P16 312 aaPredicted RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 FCRL5Q96RD9 977 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 LRRC40Q9H9A6 602 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 FAM86C1Q9NVL1 165 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 BFARQ9NZS9 450 aa10.6□□□□□ -0.71
LIG3-203ENST00000585370 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 PSMC3IPQ9P2W1 217 aaPredicted RBP10.6□□□□□ -0.71
LIG3-203ENST00000585370 ZC3H7BQ9UGR2 993 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms