RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NKD2Q969F2 451 aaPredicted RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 QKIQ96PU8 341 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 NELL2Q99435 816 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CIPCQ9C0C6 399 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 PDFQ9HBH1 243 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 HAUS2Q9NVX0 235 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CA14Q9ULX7 337 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 HS3ST2Q9Y278 367 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 STARD13Q9Y3M8 1113 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 TECTAO75443 2155 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 VCANP13611 3396 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 SHISA7A6NL88 538 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 PRRT4C9JH25 899 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 J3KR12 359 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 MATN3O15232 486 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 SNAP91O60641 907 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 PHF2O75151 1096 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 MAP3K6O95382 1288 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 ITGAVP06756 1048 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 HNRNPLP14866 589 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDRT1-207ENST00000583965 GLDCP23378 1020 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 NNMTP40261 264 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 RENBPP51606 427 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 CLCN6P51797 869 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 ARF5P84085 180 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 LMNB2Q03252 620 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 MESP2Q0VG99 397 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 AP1B1Q10567 949 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 HNRNPDQ14103 355 aaKnown RBP11.89□□□□□ -0.51
CDRT1-207ENST00000583965 OASLQ15646 514 aaKnown RBP11.89□□□□□ -0.51
CDRT1-207ENST00000583965 HEATR6Q6AI08 1181 aaKnown RBP11.89□□□□□ -0.51
CDRT1-207ENST00000583965 FSTL4Q6MZW2 842 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 DARS2Q6PI48 645 aaKnown RBP11.89□□□□□ -0.51
CDRT1-207ENST00000583965 ARHGAP36Q6ZRI8 547 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 BBS5Q8N3I7 341 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 PRELID2Q8N945 189 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 NETO2Q8NC67 525 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 C1orf54Q8WWF1 131 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 MAML1Q92585 1016 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 RUNDC3BQ96NL0 473 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 NECAB3Q96P71 396 aaPredicted RBP11.89□□□□□ -0.51
CDRT1-207ENST00000583965 LGMNQ99538 433 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 AP1M1Q9BXS5 423 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 FBRSL1Q9HCM7 1045 aaKnown RBP11.89□□□□□ -0.51
CDRT1-207ENST00000583965 SMARCAL1Q9NZC9 954 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 UBA2Q9UBT2 640 aaPredicted RBP11.89□□□□□ -0.51
CDRT1-207ENST00000583965 AMACRQ9UHK6 382 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 DNPEPQ9ULA0 475 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 PLA2G4CQ9UP65 541 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 ERVW-1Q9UQF0 538 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 DRG1Q9Y295 367 aaKnown RBP11.89□□□□□ -0.51
CDRT1-207ENST00000583965 TTC28Q96AY4 2481 aa11.89□□□□□ -0.51
CDRT1-207ENST00000583965 KANSL1LA0AUZ9 987 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 KRBA1A5PL33 1030 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 EFCAB8A8MWE9 144 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 K7EQS6 105 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 PDE2AO00408 941 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 CCNB1P14635 433 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 STIP1P31948 543 aaKnown RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 CHRNA3P32297 505 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 FNTAP49354 379 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 SERPINH1P50454 418 aaKnown RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 ST8SIA6P61647 398 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 IFI35P80217 286 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 MRPS21P82921 87 aaKnown RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 SIGLEC14Q08ET2 396 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 CCINQ13939 588 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 HSF5Q4G112 596 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 DGKKQ5KSL6 1271 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 TRMT11Q7Z4G4 463 aaKnown RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 SIX5Q8N196 739 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 SYNPOQ8N3V7 929 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 SH2D3CQ8N5H7 860 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 CCDC33Q8N5R6 958 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 TEX26Q8N6G2 289 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 MNS1Q8NEH6 495 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 HTR3CQ8WXA8 447 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 ATG4AQ8WYN0 398 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 MAGOHBQ96A72 148 aaKnown RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 ISG20Q96AZ6 181 aaKnown RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 VAT1Q99536 393 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 FAM118BQ9BPY3 351 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 CARD6Q9BX69 1037 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 OSBPL6Q9BZF3 934 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 CEP44Q9C0F1 390 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 THAP10Q9P2Z0 257 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 FEZ2Q9UHY8 353 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-207ENST00000583965 SLC8A2Q9UPR5 921 aa11.88□□□□□ -0.51
CDRT1-207ENST00000583965 UQCRHLA0A096LP55 91 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 DCXO43602 365 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 ATP9BO43861 1147 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 NEBLO76041 1014 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 STK10O94804 968 aaKnown RBP11.87□□□□□ -0.51
CDRT1-207ENST00000583965 CD160O95971 181 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 PEX11BO96011 259 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 EGFP01133 1207 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 UQCRHP07919 91 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 SRCP12931 536 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 ALADP13716 330 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 VAV1P15498 845 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms