RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SDC3O75056 442 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 GRAP2O75791 330 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 MT-CO3P00414 261 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 RHOCP08134 193 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 HNRNPA2B1P22626 353 aaKnown RBP18.34■□□□□ 0.53
MKS1-209ENST00000580127 DGKAP23743 735 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 CLCN6P51797 869 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 CENPCQ03188 943 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 C5orf22Q49AR2 442 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 BRMS1LQ5PSV4 323 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 GPR155Q7Z3F1 870 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 SLC25A45Q8N413 288 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 DCBLD1Q8N8Z6 715 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 OR4C6Q8NH72 309 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 FEM1CQ96JP0 617 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 PRORYQ9H606 182 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 USP29Q9HBJ7 922 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 APEX2Q9UBZ4 518 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 OR51B4Q9Y5P0 310 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 HS3ST4Q9Y661 456 aa18.34■□□□□ 0.53
MKS1-209ENST00000580127 TDRD6O60522 2096 aaKnown RBP18.34■□□□□ 0.53
MKS1-209ENST00000580127 TEX51A0A1B0GUA7 166 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 GTPBP10A4D1E9 387 aaKnown RBP18.33■□□□□ 0.52
MKS1-209ENST00000580127 RIOK3O14730 519 aaKnown RBP18.33■□□□□ 0.52
MKS1-209ENST00000580127 ATXN7O15265 892 aaPredicted RBP18.33■□□□□ 0.52
MKS1-209ENST00000580127 METAP1P53582 386 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 CLDN6P56747 220 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 INSM1Q01101 510 aaPredicted RBP18.33■□□□□ 0.52
MKS1-209ENST00000580127 SLC20A2Q08357 652 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 EXOC3L4Q17RC7 722 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 BROXQ5VW32 411 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 RETSATQ6NUM9 610 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 SLC26A9Q7LBE3 791 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 WDTC1Q8N5D0 677 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 C1orf74Q96LT6 269 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 FCRL3Q96P31 734 aaPredicted RBP18.33■□□□□ 0.52
MKS1-209ENST00000580127 DUSP23Q9BVJ7 150 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 CALN1Q9BXU9 219 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 TKTL2Q9H0I9 626 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 ACP6Q9NPH0 428 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.52
MKS1-209ENST00000580127 HS3ST3A1Q9Y663 406 aa18.33■□□□□ 0.52
MKS1-209ENST00000580127 LAMA5O15230 3695 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 TRIM38O00635 465 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 TLX3O43711 291 aaPredicted RBP18.32■□□□□ 0.52
MKS1-209ENST00000580127 BRINP1O60477 761 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 DAB1O75553 588 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 SRCP12931 536 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 SLC9A1P19634 815 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 BMP6P22004 513 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 CXCR3P49682 368 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 RNASE9P60153 205 aaKnown RBP18.32■□□□□ 0.52
MKS1-209ENST00000580127 PIP5KL1Q5T9C9 394 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 KDM7AQ6ZMT4 941 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 FAM183BPQ6ZVS7 135 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 ERN2Q76MJ5 926 aaKnown RBP18.32■□□□□ 0.52
MKS1-209ENST00000580127 ZSCAN30Q86W11 494 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 PASD1Q8IV76 773 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 TMEM145Q8NBT3 493 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 ZNF397Q8NF99 534 aaPredicted RBP18.32■□□□□ 0.52
MKS1-209ENST00000580127 OR2A12Q8NGT7 310 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 SHC3Q92529 594 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 CRELD1Q96HD1 420 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 DEPDC7Q96QD5 511 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 HDAC8Q9BY41 377 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 NCKIPSDQ9NZQ3 722 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 IL36AQ9UHA7 158 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 IPO11Q9UI26 975 aaKnown RBP18.32■□□□□ 0.52
MKS1-209ENST00000580127 RWDD2AQ9UIY3 292 aa18.32■□□□□ 0.52
MKS1-209ENST00000580127 GCN1Q92616 2671 aaKnown RBP18.31■□□□□ 0.52
MKS1-209ENST00000580127 GP1BAP07359 652 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 CKMT1AP12532 417 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 PRKCSHP14314 528 aaPredicted RBP18.31■□□□□ 0.52
MKS1-209ENST00000580127 PRLRP16471 622 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 OR1E1P30953 314 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 UCNP55089 124 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 TAS2R38P59533 333 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 HNRNPKP61978 463 aaKnown RBP eCLIP18.31■□□□□ 0.52
MKS1-209ENST00000580127 RPS21P63220 83 aaKnown RBP18.31■□□□□ 0.52
MKS1-209ENST00000580127 DEUP1Q05D60 604 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 ZNF284Q2VY69 593 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 TBC1D25Q3MII6 688 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 OLFML1Q6UWY5 402 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 ZNF783Q6ZMS7 281 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 DCAF4L2Q8NA75 395 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 TMEM35BQ8NCS4 154 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 MSANTD4Q8NCY6 345 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 ZNF248Q8NDW4 579 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 KLK6Q92876 244 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 ZNF578Q96N58 590 aaPredicted RBP18.31■□□□□ 0.52
MKS1-209ENST00000580127 LGMNQ99538 433 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 MYOCQ99972 504 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 NLGN3Q9NZ94 848 aa18.31■□□□□ 0.52
MKS1-209ENST00000580127 A6NNZ2 444 aa18.3■□□□□ 0.52
MKS1-209ENST00000580127 BECN2A8MW95 431 aa18.3■□□□□ 0.52
MKS1-209ENST00000580127 FFAR2O15552 330 aa18.3■□□□□ 0.52
MKS1-209ENST00000580127 OPA1O60313 960 aa18.3■□□□□ 0.52
MKS1-209ENST00000580127 MT-CO1P00395 513 aa18.3■□□□□ 0.52
MKS1-209ENST00000580127 MTIF2P46199 727 aaKnown RBP18.3■□□□□ 0.52
MKS1-209ENST00000580127 CCDC173Q0VFZ6 552 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms