RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 SLC6A14Q9UN76 642 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 ZNF148Q9UQR1 794 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 PCDHB9Q9Y5E1 797 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 MYH10P35580 1976 aa10.46□□□□□ -0.74
SS18-210ENST00000578700 ACACAQ13085 2346 aa10.46□□□□□ -0.74
SS18-210ENST00000578700 ADAMTS20P59510 1910 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 TCRBV7S2A1N4TA0A589 114 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 ESYT3A0FGR9 886 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 TBC1D3BA6NDS4 549 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 ZNF487B1APH4 448 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 MCF2LO15068 1137 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 MDM4O15151 490 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 DAPK3O43293 454 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 BEST1O76090 585 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 MBL2P11226 248 aaPredicted RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 KRT10P13645 584 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 TCF4P15884 667 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 IL1R2P27930 398 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 ARL4AP40617 200 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 CARSP49589 748 aaKnown RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 AIF1P55008 147 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 DRG2P55039 364 aaKnown RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 USP46P62068 366 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 DYNLT1P63172 113 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 CAV1Q03135 178 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 DEUP1Q05D60 604 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 SCAPQ12770 1279 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 KLF1Q13351 362 aaPredicted RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 CASP8Q14790 479 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 MAP7D1Q3KQU3 841 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 DRICH1Q6PGQ1 229 aaPredicted RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 RHBDF2Q6PJF5 856 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 CEP128Q6ZU80 1094 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 DENND5BQ6ZUT9 1274 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 PIP4P1Q86T03 277 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 RGL4Q8IZJ4 473 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 MINDY1Q8N5J2 469 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 ARFGAP1Q8N6T3 406 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 GOLGA6L1Q8N7Z2 621 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 PNPLA1Q8N8W4 532 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 CEP76Q8TAP6 659 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 AENQ8WTP8 325 aaKnown RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 CLEC4CQ8WTT0 213 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 CENPIQ92674 756 aaPredicted RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 CAVIN3Q969G5 261 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 HAUS1Q96CS2 278 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 PIWIL1Q96J94 861 aaKnown RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 C8orf48Q96LL4 319 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 SLC2A13Q96QE2 648 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 KCNK16Q96T55 309 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 PKMYT1Q99640 499 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 FERMT1Q9BQL6 677 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 TRIM31Q9BZY9 425 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 TSPYL1Q9H0U9 437 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 FBXO44Q9H4M3 255 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 FAM204AQ9H8W3 233 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 OGFRQ9NZT2 677 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 CFAP97Q9P2B7 532 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 PILRBQ9UKJ0 227 aa10.45□□□□□ -0.74
SS18-210ENST00000578700 DRG1Q9Y295 367 aaKnown RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 HELZ2Q9BYK8 2649 aaKnown RBP10.45□□□□□ -0.74
SS18-210ENST00000578700 H0Y626 953 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 APOC4-APOC2K7ER74 178 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 M0QYT0 321 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 SLC9A3R1O14745 358 aaPredicted RBP10.44□□□□□ -0.74
SS18-210ENST00000578700 APOL1O14791 398 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 ZBTB24O43167 697 aaPredicted RBP10.44□□□□□ -0.74
SS18-210ENST00000578700 LIASO43766 372 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 KALRNO60229 2985 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 SH3BP5O60239 455 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 CST8O60676 142 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 ADAM23O75077 832 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 ZNF189O75820 626 aaPredicted RBP10.44□□□□□ -0.74
SS18-210ENST00000578700 GABBR2O75899 941 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 TRIM16O95361 564 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 APOC2P02655 101 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 ADH5P11766 374 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 NCAM1P13591 858 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 TCF3P15923 654 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 ADCY8P40145 1251 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 GRIA2P42262 883 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 PTGIRP43119 386 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 MAGEA11P43364 429 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 TNFRSF4P43489 277 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 KIR2DL1P43626 348 aaPredicted RBP10.44□□□□□ -0.74
SS18-210ENST00000578700 HDAC4P56524 1084 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 ZNF33AQ06730 810 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 NME3Q13232 169 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 PTK6Q13882 451 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 SIX1Q15475 284 aaPredicted RBP10.44□□□□□ -0.74
SS18-210ENST00000578700 PPP6R3Q5H9R7 873 aaPredicted RBP10.44□□□□□ -0.74
SS18-210ENST00000578700 EFHC2Q5JST6 749 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 BTBD8Q5XKL5 378 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 DUPD1Q68J44 220 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 TXNRD3NBQ6F5E7 133 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 PM20D1Q6GTS8 502 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 TTC27Q6P3X3 843 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 BZW1Q7L1Q6 419 aaKnown RBP10.44□□□□□ -0.74
SS18-210ENST00000578700 BEND5Q7L4P6 421 aa10.44□□□□□ -0.74
SS18-210ENST00000578700 RNF139Q8WU17 664 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms