RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 CA12O43570 354 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 XPOTO43592 962 aaKnown RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 HSF2BPO75031 334 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 CD4P01730 458 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 SETSIPP0DME0 302 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 PYGMP11217 842 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 CYP2C9P11712 490 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 AKR1A1P14550 325 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 KCNE1P15382 129 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 PTPN1P18031 435 aaKnown RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 KRT4P19013 534 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 CYP3A5P20815 502 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 PAX3P23760 479 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 COILP38432 576 aaPredicted RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 PNPLA4P41247 253 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 TNNT3P45378 269 aaPredicted RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 MEOX1P50221 254 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 DNA2P51530 1060 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 RAD23BP54727 409 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 SNX16P57768 344 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 LACTBP83111 547 aaPredicted RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 DR1Q01658 176 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 MYO1EQ12965 1108 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 PCOLCEQ15113 449 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 SIX1Q15475 284 aaPredicted RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 MFSD14CQ5VZR4 134 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 TAF2Q6P1X5 1199 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 NOTUMQ6P988 496 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 DRICH1Q6PGQ1 229 aaPredicted RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 LCLAT1Q6UWP7 414 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 CATSPER4Q7RTX7 472 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 CROCCP2Q86T23 111 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 RPAINQ86UA6 219 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 TLK2Q86UE8 772 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 UNC93AQ86WB7 457 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 ERICH1Q86X53 443 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 KLHL7Q8IXQ5 586 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 ULK2Q8IYT8 1036 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 RCOR2Q8IZ40 523 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 WDTC1Q8N5D0 677 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 C3orf20Q8ND61 904 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 BEST2Q8NFU1 509 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.08□□□□□ -1.6
IFT20-205ENST00000578009 GRK7Q8WTQ7 553 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 TFAP2BQ92481 460 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 KRT35Q92764 455 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 MCRS1Q96EZ8 462 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 HPDLQ96IR7 371 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 RBM41Q96IZ5 413 aaKnown RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 SNX27Q96L92 541 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 SCLT1Q96NL6 688 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 ZFYVE21Q9BQ24 234 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 AP1M1Q9BXS5 423 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 FRMD8P1Q9BZ68 369 aaPredicted RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 TGIF2Q9GZN2 237 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 DDX47Q9H0S4 455 aaKnown RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 UPF3AQ9H1J1 476 aaKnown RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 DPP3Q9NY33 737 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 DDX56Q9NY93 547 aaKnown RBP5.08□□□□□ -1.6
IFT20-205ENST00000578009 PRKAG3Q9UGI9 489 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 AMACRQ9UHK6 382 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 FBXO10Q9UK96 956 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 NFU1Q9UMS0 254 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 AGAP1Q9UPQ3 857 aa5.08□□□□□ -1.6
IFT20-205ENST00000578009 PLXNB2O15031 1838 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 C17orf102A2RUQ5 167 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 TMEM110-MUSTN1A8MSY1 372 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 H3BQF6 201 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 AGPSO00116 658 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 O00370 1275 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 NDC80O14777 642 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 TTI1O43156 1089 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 ADCY6O43306 1168 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 SYF2O95926 243 aaKnown RBP5.07□□□□□ -1.6
IFT20-205ENST00000578009 ATF7P17544 494 aaPredicted RBP5.07□□□□□ -1.6
IFT20-205ENST00000578009 ECHS1P30084 290 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 CYP2C19P33261 490 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 ETFBP38117 255 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 MARCKSL1P49006 195 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 EIF3BP55884 814 aaKnown RBP5.07□□□□□ -1.6
IFT20-205ENST00000578009 RNASE9P60153 205 aaKnown RBP5.07□□□□□ -1.6
IFT20-205ENST00000578009 OSTNP61366 133 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 CAV1Q03135 178 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 CCNG2Q16589 344 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 TAZQ16635 292 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 FSCN1Q16658 493 aaKnown RBP5.07□□□□□ -1.6
IFT20-205ENST00000578009 LAIR1Q6GTX8 287 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 DNAJC24Q6P3W2 148 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 MMS22LQ6ZRQ5 1243 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 EP400NLQ6ZTU2 488 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 DPH6Q7L8W6 267 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 ARCQ7LC44 396 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 CXXC5Q7LFL8 322 aaKnown RBP5.07□□□□□ -1.6
IFT20-205ENST00000578009 RSPH3Q86UC2 560 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 SESTD1Q86VW0 696 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 SCUBE1Q8IWY4 988 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 NLGN4XQ8N0W4 816 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 CRYBG2Q8N1P7 616 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 SLC4A11Q8NBS3 891 aa5.07□□□□□ -1.6
IFT20-205ENST00000578009 ATL2Q8NHH9 583 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms