RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 NCEH1Q6PIU2 408 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 DHRS13Q6UX07 377 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 VPS36Q86VN1 386 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 MCOLN2Q8IZK6 566 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 PDCD7Q8N8D1 485 aaKnown RBP16.45■□□□□ 0.22
VAPA-204ENST00000577901 MYEOVQ96EZ4 313 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 C1orf74Q96LT6 269 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 SIK2Q9H0K1 926 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 SERGEFQ9UGK8 458 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 INTS6Q9UL03 887 aaKnown RBP16.45■□□□□ 0.22
VAPA-204ENST00000577901 HS3ST4Q9Y661 456 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 TMEM131Q92545 1883 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 IGSF10Q6WRI0 2623 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 A0A1B0GTQ1 180 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 A0A1W2PP55 124 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 C2CD4BA6NLJ0 364 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 MID1O15344 667 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 ENDOD1O94919 500 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 MOCS3O95396 460 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 ADCY5O95622 1261 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 SERPING1P05155 500 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 DESP17661 470 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 GPD1P21695 349 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 RFC1P35251 1148 aaPredicted RBP16.44■□□□□ 0.22
VAPA-204ENST00000577901 PTPN9P43378 593 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 OXCT1P55809 520 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 ARID5BQ14865 1188 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 NUMA1Q14980 2115 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 ARL13BQ3SXY8 428 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 CCDC14Q49A88 953 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 TDRD12Q587J7 1177 aaKnown RBP16.44■□□□□ 0.22
VAPA-204ENST00000577901 FSCBQ5H9T9 825 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 C9orf64Q5T6V5 341 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 E4F1Q66K89 784 aaPredicted RBP16.44■□□□□ 0.22
VAPA-204ENST00000577901 SPECC1LQ69YQ0 1117 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 FBXL22Q6P050 247 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 DCUN1D2Q6PH85 259 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 LRRC31Q6UY01 552 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 STRADAQ7RTN6 431 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 BNIPLQ7Z465 357 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 KDM1BQ8NB78 822 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 OR2T34Q8NGX1 318 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 JOSD2Q8TAC2 188 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 SKA1Q96BD8 255 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 RPRD1AQ96P16 312 aaPredicted RBP16.44■□□□□ 0.22
VAPA-204ENST00000577901 HAPLN3Q96S86 360 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 ELF4Q99607 663 aaPredicted RBP16.44■□□□□ 0.22
VAPA-204ENST00000577901 OMDQ99983 421 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 NEUROG2Q9H2A3 272 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 PARVAQ9NVD7 372 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 VANGL2Q9ULK5 521 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 ERVW-1Q9UQF0 538 aa16.44■□□□□ 0.22
VAPA-204ENST00000577901 LRRC72A6NJI9 287 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 RTN2O75298 545 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 RNASEH2AO75792 299 aaKnown RBP16.43■□□□□ 0.22
VAPA-204ENST00000577901 GJB6O95452 261 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 FTLP02792 175 aaPredicted RBP16.43■□□□□ 0.22
VAPA-204ENST00000577901 GYPCP04921 128 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 SRPRAP08240 638 aaKnown RBP16.43■□□□□ 0.22
VAPA-204ENST00000577901 TPM1P09493 284 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 RRM1P23921 792 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 SLC8A1P32418 973 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 SLC12A1Q13621 1099 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 TRIM14Q14142 442 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 CDO1Q16878 200 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 C15orf59Q2T9L4 293 aaPredicted RBP16.43■□□□□ 0.22
VAPA-204ENST00000577901 PITRM1Q5JRX3 1037 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 PRAMEF14Q5SWL7 426 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 WDR59Q6PJI9 974 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 FAM131BQ86XD5 332 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 GATAD2AQ86YP4 633 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 MMAAQ8IVH4 418 aaKnown RBP16.43■□□□□ 0.22
VAPA-204ENST00000577901 CCAR2Q8N163 923 aaKnown RBP16.43■□□□□ 0.22
VAPA-204ENST00000577901 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.43■□□□□ 0.22
VAPA-204ENST00000577901 EBF2Q9HAK2 575 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 TAS2R14Q9NYV8 317 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 ADAMTS1Q9UHI8 967 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 FZD4Q9ULV1 537 aa16.43■□□□□ 0.22
VAPA-204ENST00000577901 A0A087WV48 116 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.42■□□□□ 0.22
VAPA-204ENST00000577901 A0A1B0GVM2 712 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 TARSL2A2RTX5 802 aaKnown RBP16.42■□□□□ 0.22
VAPA-204ENST00000577901 TCAF2A6NFQ2 919 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 TTC34A8MYJ7 566 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 DDX3XO00571 662 aaKnown RBP eCLIP16.42■□□□□ 0.221e-55■■■■□ 24.4
VAPA-204ENST00000577901 WNT1P04628 370 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 CASP14P31944 242 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 CTSOP43234 321 aaPredicted RBP16.42■□□□□ 0.22
VAPA-204ENST00000577901 ZNF177Q13360 481 aaPredicted RBP16.42■□□□□ 0.22
VAPA-204ENST00000577901 TMPRSS12Q86WS5 348 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 TRIM11Q96F44 468 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 ANLNQ9NQW6 1124 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 AASDHPPTQ9NRN7 309 aa16.42■□□□□ 0.22
VAPA-204ENST00000577901 EDDM13A0A1B0GTR0 161 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 TCRBV5S1A1TA0A578 114 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 E9PAM4 449 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 ENC1O14682 589 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 CLDN11O75508 207 aa16.41■□□□□ 0.22
VAPA-204ENST00000577901 LDOC1O95751 146 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms