RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 TUBB4AP04350 444 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 SRCP12931 536 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 IL12RB1P42701 662 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 DYNLT1P63172 113 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 PPIDQ08752 370 aaKnown RBP12.96□□□□□ -0.33
MKS1-206ENST00000577824 XRCC4Q13426 336 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 GAS6Q14393 721 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 PRKD1Q15139 912 aaPredicted RBP12.96□□□□□ -0.33
MKS1-206ENST00000577824 TMCO4Q5TGY1 634 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 TIGD7Q6NT04 549 aaPredicted RBP12.96□□□□□ -0.33
MKS1-206ENST00000577824 ARHGAP36Q6ZRI8 547 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 ATPAF2Q8N5M1 289 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 TTC13Q8NBP0 860 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 RPLP0P6Q8NHW5 317 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 FRS2Q8WU20 508 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 CYB5D2Q8WUJ1 264 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 SORCS1Q8WY21 1168 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 P3H4Q92791 437 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 ISG20Q96AZ6 181 aaKnown RBP12.96□□□□□ -0.33
MKS1-206ENST00000577824 QKIQ96PU8 341 aaKnown RBP eCLIP12.96□□□□□ -0.33
MKS1-206ENST00000577824 HEMGNQ9BXL5 484 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 FRMD8P1Q9BZ68 369 aaPredicted RBP12.96□□□□□ -0.33
MKS1-206ENST00000577824 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 LMAN1LQ9HAT1 526 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 C11orf16Q9NQ32 467 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 IPO11Q9UI26 975 aaKnown RBP12.96□□□□□ -0.33
MKS1-206ENST00000577824 MMP17Q9ULZ9 603 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 HPCAL4Q9UM19 191 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 WDFY4Q6ZS81 3184 aa12.96□□□□□ -0.33
MKS1-206ENST00000577824 KMT2EQ8IZD2 1858 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 HACD1B0YJ81 288 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 J3KR12 359 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 KIF2AO00139 706 aaPredicted RBP12.95□□□□□ -0.34
MKS1-206ENST00000577824 PPP1R12AO14974 1030 aaPredicted RBP12.95□□□□□ -0.34
MKS1-206ENST00000577824 ADAM23O75077 832 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 ZNF189O75820 626 aaPredicted RBP12.95□□□□□ -0.34
MKS1-206ENST00000577824 CCNCP24863 283 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 NTSR1P30989 418 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 STK19P49842 368 aaPredicted RBP12.95□□□□□ -0.34
MKS1-206ENST00000577824 SEC13P55735 322 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 PDK1Q15118 436 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 SIX1Q15475 284 aaPredicted RBP12.95□□□□□ -0.34
MKS1-206ENST00000577824 HNRNPA1L2Q32P51 320 aaKnown RBP12.95□□□□□ -0.34
MKS1-206ENST00000577824 EMC10Q5UCC4 262 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 C22orf39Q6P5X5 142 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 PKN3Q6P5Z2 889 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 NPNTQ6UXI9 565 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 SYT13Q7L8C5 426 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 SPEM1Q8N4L4 309 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 FLCNQ8NFG4 579 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 ACTL9Q8TC94 416 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 ACTRT1Q8TDG2 376 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
MKS1-206ENST00000577824 C16orf45Q96MC5 204 aaPredicted RBP12.95□□□□□ -0.34
MKS1-206ENST00000577824 SPON2Q9BUD6 331 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 EPHX3Q9H6B9 360 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 UBA2Q9UBT2 640 aaPredicted RBP12.95□□□□□ -0.34
MKS1-206ENST00000577824 AMACRQ9UHK6 382 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 PLA2G4CQ9UP65 541 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 HEY1Q9Y5J3 304 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 STON1Q9Y6Q2 735 aa12.95□□□□□ -0.34
MKS1-206ENST00000577824 A0A1W2PQF6 199 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 TCRBV7S2A1N4TA0A589 114 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 PGRMC1O00264 195 aaKnown RBP12.94□□□□□ -0.34
MKS1-206ENST00000577824 MATN3O15232 486 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 GPR37L1O60883 481 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 ATG13O75143 517 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 ZNF821O75541 412 aaPredicted RBP12.94□□□□□ -0.34
MKS1-206ENST00000577824 TMCC1O94876 653 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 MAP3K6O95382 1288 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 MT-CO1P00395 513 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 FGGP02679 453 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 PRKCHP24723 683 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 CXCR5P32302 372 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 TIE1P35590 1138 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 ST8SIA6P61647 398 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 OTUD4Q01804 1114 aaKnown RBP12.94□□□□□ -0.34
MKS1-206ENST00000577824 HNRNPDQ14103 355 aaKnown RBP12.94□□□□□ -0.34
MKS1-206ENST00000577824 LLGL1Q15334 1064 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 FNDC3BQ53EP0 1204 aaKnown RBP12.94□□□□□ -0.34
MKS1-206ENST00000577824 ALG1LQ6GMV1 187 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 DRICH1Q6PGQ1 229 aaPredicted RBP12.94□□□□□ -0.34
MKS1-206ENST00000577824 SERPINA13PQ6UXR4 307 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 LINGO4Q6UY18 593 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 CHPFQ8IZ52 775 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 FBXL6Q8N531 539 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 TEX26Q8N6G2 289 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 ALLCQ8N6M5 410 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 PCDH20Q8N6Y1 951 aaKnown RBP12.94□□□□□ -0.34
MKS1-206ENST00000577824 NETO2Q8NC67 525 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 SLC35B2Q8TB61 432 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 COG1Q8WTW3 980 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 MAIP1Q8WWC4 291 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 RPL10LQ96L21 214 aaKnown RBP12.94□□□□□ -0.34
MKS1-206ENST00000577824 ACOX2Q99424 681 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 FBRSQ9HAH7 460 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 SP110Q9HB58 689 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 CACNA2D2Q9NY47 1150 aa12.94□□□□□ -0.34
MKS1-206ENST00000577824 SAE1Q9UBE0 346 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms