RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 KCNV2Q8TDN2 545 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 LRRN4Q8WUT4 740 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 ACDQ96AP0 544 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 HAUS1Q96CS2 278 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 WDR24Q96S15 920 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 C2orf49Q9BVC5 232 aaPredicted RBP8.75□□□□□ -1.01
NUP88-211ENST00000575976 CARD9Q9H257 536 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 CHRDQ9H2X0 955 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 PRDM16Q9HAZ2 1276 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 PDFQ9HBH1 243 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 POLR3BQ9NW08 1133 aaPredicted RBP8.75□□□□□ -1.01
NUP88-211ENST00000575976 CACNA2D2Q9NY47 1150 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 DTLQ9NZJ0 730 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 DLGAP2Q9P1A6 1054 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 SAE1Q9UBE0 346 aaPredicted RBP8.75□□□□□ -1.01
NUP88-211ENST00000575976 IPO11Q9UI26 975 aaKnown RBP8.75□□□□□ -1.01
NUP88-211ENST00000575976 SLCO3A1Q9UIG8 710 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 SLC25A13Q9UJS0 675 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 HPCAL4Q9UM19 191 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 PLA2G4CQ9UP65 541 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 EFR3BQ9Y2G0 817 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 HEY1Q9Y5J3 304 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 STON1Q9Y6Q2 735 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 TCRBV7S2A1N4TA0A589 114 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 TTC34A8MYJ7 566 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 CHURC1-FNTBB4DL54 471 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 K7ERQ8 282 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 SGK1O00141 431 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 FANCGO15287 622 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 SMAD6O43541 496 aaKnown RBP8.74□□□□□ -1.01
NUP88-211ENST00000575976 CEP104O60308 925 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 MAFKO60675 156 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 PRAMEF11O60813 436 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 ADAM23O75077 832 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 KRT37O76014 449 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 TJP3O95049 919 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 SRCP12931 536 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 HLA-EP13747 358 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 TGM2P21980 687 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 PRKCHP24723 683 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 NTSR1P30989 418 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 NNMTP40261 264 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 RPS9P46781 194 aaKnown RBP8.74□□□□□ -1.01
NUP88-211ENST00000575976 ST8SIA6P61647 398 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 SLC20A2Q08357 652 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 GALNT2Q10471 571 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 ENPP2Q13822 863 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 FNDC3BQ53EP0 1204 aaKnown RBP8.74□□□□□ -1.01
NUP88-211ENST00000575976 SDE2Q6IQ49 451 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 RETSATQ6NUM9 610 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 B4GALNT4Q76KP1 1039 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 SH2D3CQ8N5H7 860 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 ZNF366Q8N895 744 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 ATP11CQ8NB49 1132 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 CCDC26Q8TAB7 109 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 ERLEC1Q96DZ1 483 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 TMEM245Q9H330 911 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 MTG2Q9H4K7 406 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 SP110Q9HB58 689 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 FAM86C1Q9NVL1 165 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 C2orf42Q9NWW7 574 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 HS3ST2Q9Y278 367 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 RAD54BQ9Y620 910 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 CHD8Q9HCK8 2581 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 KMT2EQ8IZD2 1858 aa8.74□□□□□ -1.01
NUP88-211ENST00000575976 CACNA1HO95180 2353 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 F5P12259 2224 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 TRIOO75962 3097 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 CXorf51AA0A1B0GTR3 108 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 ZSCAN5CA6NGD5 496 aaPredicted RBP8.73□□□□□ -1.01
NUP88-211ENST00000575976 APOC4-APOC2K7ER74 178 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 NPC1O15118 1278 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 ATP9BO43861 1147 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 ATG13O75143 517 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 PEX11BO96011 259 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 APOC2P02655 101 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 HOXB2P14652 356 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 VAV1P15498 845 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 MX2P20592 715 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 AVPR2P30518 371 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 GARSP41250 739 aaKnown RBP8.73□□□□□ -1.01
NUP88-211ENST00000575976 MAGEA9P43362 315 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 NR2C2P49116 596 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 SERPINH1P50454 418 aaKnown RBP8.73□□□□□ -1.01
NUP88-211ENST00000575976 VASPP50552 380 aaPredicted RBP8.73□□□□□ -1.01
NUP88-211ENST00000575976 ETF1P62495 437 aaKnown RBP8.73□□□□□ -1.01
NUP88-211ENST00000575976 OTUD4Q01804 1114 aaKnown RBP8.73□□□□□ -1.01
NUP88-211ENST00000575976 IL10RBQ08334 325 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 MTAPQ13126 283 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 KLF1Q13351 362 aaPredicted RBP8.73□□□□□ -1.01
NUP88-211ENST00000575976 NOMO1Q15155 1222 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 E2F5Q15329 346 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 CYTH1Q15438 398 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 DLG2Q15700 870 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 ACCSLQ4AC99 568 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 HSF5Q4G112 596 aaPredicted RBP8.73□□□□□ -1.01
NUP88-211ENST00000575976 EOGTQ5NDL2 527 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 CCDC181Q5TID7 509 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 KIAA1211LQ6NV74 962 aa8.73□□□□□ -1.01
NUP88-211ENST00000575976 SERPINA13PQ6UXR4 307 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms