RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 EFR3BQ9Y2G0 817 aa14.28□□□□□ -0.12
RPAIN-217ENST00000575711 JRKLQ9Y4A0 524 aa14.28□□□□□ -0.12
RPAIN-217ENST00000575711 KCNK3O14649 394 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 LAMTOR5O43504 91 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 ATP9BO43861 1147 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 SYNCRIPO60506 623 aaKnown RBP14.27□□□□□ -0.13
RPAIN-217ENST00000575711 PRAMEF11O60813 436 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 TJP3O95049 919 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 MT-CO1P00395 513 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 EPHX1P07099 455 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 SRCP12931 536 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 HLA-EP13747 358 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 TGM2P21980 687 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 CXCL12P48061 93 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.13
RPAIN-217ENST00000575711 SATB1Q01826 763 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 IL10RBQ08334 325 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 GALNT2Q10471 571 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 CRY1Q16526 586 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 CCDC181Q5TID7 509 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 AADACL2Q6P093 401 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 METTL3Q86U44 580 aaKnown RBP14.27□□□□□ -0.13
RPAIN-217ENST00000575711 LRRC49Q8IUZ0 686 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 C1orf210Q8IVY1 113 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 TP53INP2Q8IXH6 220 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 LRFN3Q9BTN0 628 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 HEMGNQ9BXL5 484 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 TLR10Q9BXR5 811 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 CARD9Q9H257 536 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 POLMQ9NP87 494 aaPredicted RBP14.27□□□□□ -0.13
RPAIN-217ENST00000575711 DTLQ9NZJ0 730 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 UBA2Q9UBT2 640 aaPredicted RBP14.27□□□□□ -0.13
RPAIN-217ENST00000575711 IPO11Q9UI26 975 aaKnown RBP14.27□□□□□ -0.13
RPAIN-217ENST00000575711 HEY1Q9Y5J3 304 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 RAD54BQ9Y620 910 aa14.27□□□□□ -0.13
RPAIN-217ENST00000575711 EDDM13A0A1B0GTR0 161 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 TTC34A8MYJ7 566 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 J3KR12 359 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 K7ERQ8 282 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 ENC1O14682 589 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 ZBTB24O43167 697 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-217ENST00000575711 MAP3K6O95382 1288 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 GARSP41250 739 aaKnown RBP14.26□□□□□ -0.13
RPAIN-217ENST00000575711 NR2C2P49116 596 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 DGKEP52429 567 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 GNG11P61952 73 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 DLG2Q15700 870 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 HNRNPA1L2Q32P51 320 aaKnown RBP14.26□□□□□ -0.13
RPAIN-217ENST00000575711 DCAF12L1Q5VU92 463 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 TIGD7Q6NT04 549 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-217ENST00000575711 LEKR1Q6ZMV7 388 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 ARHGAP36Q6ZRI8 547 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 BBS12Q6ZW61 710 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 BZW1Q7L1Q6 419 aaKnown RBP14.26□□□□□ -0.13
RPAIN-217ENST00000575711 ZNF366Q8N895 744 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 TSTD1Q8NFU3 115 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 NSMCE1Q8WV22 266 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 CASKIN2Q8WXE0 1202 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 P3H4Q92791 437 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 CEP44Q9C0F1 390 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 POLR3BQ9NW08 1133 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-217ENST00000575711 C2orf42Q9NWW7 574 aa14.26□□□□□ -0.13
RPAIN-217ENST00000575711 A0A1W2PQF6 199 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 TARSL2A2RTX5 802 aaKnown RBP14.25□□□□□ -0.13
RPAIN-217ENST00000575711 PPP1R12AO14974 1030 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-217ENST00000575711 MAFKO60675 156 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 ALDH1A2O94788 518 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 TMCC1O94876 653 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 PAPSS2O95340 614 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-217ENST00000575711 COL9A1P20849 921 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 NUBP1P53384 320 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 ADCY2Q08462 1091 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 SLC10A2Q12908 348 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-217ENST00000575711 RFTN1Q14699 578 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-217ENST00000575711 PDK1Q15118 436 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 INO80DQ53TQ3 878 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-217ENST00000575711 C22orf39Q6P5X5 142 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 NPNTQ6UXI9 565 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 TMEM92Q6UXU6 159 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 C17orf53Q8N3J3 647 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-217ENST00000575711 CCNYQ8ND76 341 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 FRS2Q8WU20 508 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 HDAC11Q96DB2 347 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 CCDC114Q96M63 670 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 ZNF599Q96NL3 588 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 PDFQ9HBH1 243 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 PRMT8Q9NR22 394 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-217ENST00000575711 FCF1Q9Y324 198 aaKnown RBP14.25□□□□□ -0.13
RPAIN-217ENST00000575711 ACTL7AQ9Y615 435 aa14.25□□□□□ -0.13
RPAIN-217ENST00000575711 TCRBV21S2A2A0A5A6 115 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 APOC4-APOC2K7ER74 178 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 SMAD6O43541 496 aaKnown RBP14.24□□□□□ -0.13
RPAIN-217ENST00000575711 BNIP3LO60238 219 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 APBB3O95704 486 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 CD160O95971 181 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 APOC2P02655 101 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 PECAM1P16284 738 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-217ENST00000575711 CCNCP24863 283 aa14.24□□□□□ -0.13
RPAIN-217ENST00000575711 RECQLP46063 649 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-217ENST00000575711 CAMK2GQ13555 558 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms