RNA–Protein interactions for RNA: ENST00000573745.1

CLDN7-206, Transcript of claudin 7, humanhuman

TSL 2

Gene CLDN7, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-206ENST00000573745 FRS2Q8WU20 508 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 HMGB4Q8WW32 186 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 PTPRN2Q92932 1015 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 ERLEC1Q96DZ1 483 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 KCNF1Q9H3M0 494 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 MTG2Q9H4K7 406 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 FBRSQ9HAH7 460 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 LZTFL1Q9NQ48 299 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 BCCIPQ9P287 314 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLDN7-206ENST00000573745 SMAD6O43541 496 aaKnown RBP16.27■□□□□ 0.2
CLDN7-206ENST00000573745 SIN3BO75182 1162 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 CD160O95971 181 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 ZFXP17010 805 aaPredicted RBP16.27■□□□□ 0.2
CLDN7-206ENST00000573745 GABRG2P18507 467 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 CTNNA2P26232 953 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 CTNNA1P35221 906 aaKnown RBP16.27■□□□□ 0.2
CLDN7-206ENST00000573745 SERPINH1P50454 418 aaKnown RBP16.27■□□□□ 0.2
CLDN7-206ENST00000573745 DMWDQ09019 674 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 INO80DQ53TQ3 878 aaPredicted RBP16.27■□□□□ 0.2
CLDN7-206ENST00000573745 MFSD7Q6UXD7 560 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 METTL3Q86U44 580 aaKnown RBP16.27■□□□□ 0.2
CLDN7-206ENST00000573745 WDR5BQ86VZ2 330 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 PQLC3Q8N755 202 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 ZBTB44Q8NCP5 570 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 MDGA1Q8NFP4 955 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 EXD1Q8NHP7 514 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.27■□□□□ 0.2
CLDN7-206ENST00000573745 CASKIN2Q8WXE0 1202 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 KRT35Q92764 455 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 MRGPRX1Q96LB2 322 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 CEP44Q9C0F1 390 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 MFHAS1Q9Y4C4 1052 aa16.27■□□□□ 0.2
CLDN7-206ENST00000573745 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
CLDN7-206ENST00000573745 MIF4GDA9UHW6 222 aaKnown RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 J3KR12 359 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 ZSCAN12O43309 604 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 RNASEH1O60930 286 aaKnown RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 CNR2P34972 360 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 CDKN2BP42772 138 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 PEX5P50542 639 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 RWDD2BP57060 319 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 TAZQ16635 292 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 USP39Q53GS9 565 aaKnown RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 NCBP2-AS2Q69YL0 99 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 PLPP6Q8IY26 295 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 UBL4BQ8N7F7 174 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 NETO2Q8NC67 525 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 PRCCQ92733 491 aaPredicted RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 ATOH1Q92858 354 aaPredicted RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 ISG20Q96AZ6 181 aaKnown RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 SIPA1Q96FS4 1042 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 RBM41Q96IZ5 413 aaKnown RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 MKRN2Q9H000 416 aaKnown RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 IPO11Q9UI26 975 aaKnown RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 ARIH1Q9Y4X5 557 aaPredicted RBP16.26■□□□□ 0.19
CLDN7-206ENST00000573745 PCDHGA2Q9Y5H1 932 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 ACTL7AQ9Y615 435 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 CAPN6Q9Y6Q1 641 aa16.26■□□□□ 0.19
CLDN7-206ENST00000573745 APOL1O14791 398 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 MCF2LO15068 1137 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 PRAMEF11O60813 436 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 FTCDO95954 541 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 VAV1P15498 845 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 NDUFV2P19404 249 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 CETN2P41208 172 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 RECQLP46063 649 aaPredicted RBP16.25■□□□□ 0.19
CLDN7-206ENST00000573745 MARCKSL1P49006 195 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 DNA2P51530 1060 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 COPAP53621 1224 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 COPS2P61201 443 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 IL10RBQ08334 325 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 BYSLQ13895 437 aaKnown RBP16.25■□□□□ 0.19
CLDN7-206ENST00000573745 TFDP2Q14188 446 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 TFDP3Q5H9I0 405 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 SLC9A4Q6AI14 798 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 ZC3H14Q6PJT7 736 aaKnown RBP16.25■□□□□ 0.19
CLDN7-206ENST00000573745 LEKR1Q6ZMV7 388 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 SPOCD1Q6ZMY3 1216 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 RFX6Q8HWS3 928 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 CCDC50Q8IVM0 306 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 TP53INP2Q8IXH6 220 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 STK40Q8N2I9 435 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 PCDH20Q8N6Y1 951 aaKnown RBP16.25■□□□□ 0.19
CLDN7-206ENST00000573745 CCDC114Q96M63 670 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 FAM129BQ96TA1 746 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 RSPH9Q9H1X1 276 aaPredicted RBP16.25■□□□□ 0.19
CLDN7-206ENST00000573745 ITM2CQ9NQX7 267 aa16.25■□□□□ 0.19
CLDN7-206ENST00000573745 UBA2Q9UBT2 640 aaPredicted RBP16.25■□□□□ 0.19
CLDN7-206ENST00000573745 FCF1Q9Y324 198 aaKnown RBP16.25■□□□□ 0.19
CLDN7-206ENST00000573745 HRO43593 1189 aa16.24■□□□□ 0.19
CLDN7-206ENST00000573745 BNIP3LO60238 219 aa16.24■□□□□ 0.19
CLDN7-206ENST00000573745 ZNF217O75362 1048 aa16.24■□□□□ 0.19
CLDN7-206ENST00000573745 ZNF821O75541 412 aaPredicted RBP16.24■□□□□ 0.19
CLDN7-206ENST00000573745 C7P10643 843 aa16.24■□□□□ 0.19
CLDN7-206ENST00000573745 ACADMP11310 421 aa16.24■□□□□ 0.19
CLDN7-206ENST00000573745 KRT10P13645 584 aa16.24■□□□□ 0.19
CLDN7-206ENST00000573745 MX2P20592 715 aa16.24■□□□□ 0.19
CLDN7-206ENST00000573745 ZBTB16Q05516 673 aa16.24■□□□□ 0.19
CLDN7-206ENST00000573745 ELAVL3Q14576 367 aaKnown RBP16.24■□□□□ 0.19
CLDN7-206ENST00000573745 CYTH1Q15438 398 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms