RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SLC5A9Q2M3M2 681 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.91■□□□□ 0.14
NUP88-207ENST00000573584 TAPT1Q6NXT6 567 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 ALKAL1Q6UXT8 129 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 BNIPLQ7Z465 357 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 ARHGAP22Q7Z5H3 698 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 SETD3Q86TU7 594 aaPredicted RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 CPSF7Q8N684 471 aaKnown RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 BHLHE22Q8NFJ8 381 aaPredicted RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 RDH11Q8TC12 318 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 OPTNQ96CV9 577 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 TNIP3Q96KP6 325 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 PRICKLE1Q96MT3 831 aaPredicted RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 MCMBPQ9BTE3 642 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 DNAI2Q9GZS0 605 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 MROH8Q9H579 483 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 KLK14Q9P0G3 267 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 RAB26Q9ULW5 256 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 CDYLQ9Y232 598 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 LZTS1Q9Y250 596 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 CCDC78A2IDD5 438 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 ERI2A8K979 691 aaKnown RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 PHGDHO43175 533 aaKnown RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 CABYRO75952 493 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 NMBRP28336 390 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 ATXN3P54252 364 aaPredicted RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 PPIDQ08752 370 aaKnown RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 MAP7Q14244 749 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 ADGRE1Q14246 886 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 USP10Q14694 798 aaKnown RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 PGAM4Q8N0Y7 254 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 SIX6OS1Q8N1H7 587 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 RNF169Q8NCN4 708 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 B3GALNT2Q8NCR0 500 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 APBA2Q99767 749 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 IL22Q9GZX6 179 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 FAM49AQ9H0Q0 323 aaPredicted RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 WDR41Q9HAD4 459 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 GDAP2Q9NXN4 497 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 UBP1Q9NZI7 540 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 RIMS3Q9UJD0 308 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 PCDHGB4Q9UN71 923 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 RUVBL2Q9Y230 463 aaKnown RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 PCDHGB5Q9Y5G0 923 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 AP4B1Q9Y6B7 739 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 SLC22A2O15244 555 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 CD4P01730 458 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 TFAP2AP05549 437 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 SBK3P0C264 359 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 HADHAP40939 763 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 HK2P52789 917 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 TPI1P60174 286 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 HFE2Q6ZVN8 426 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 TMEM126BQ8IUX1 230 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 CATSPER1Q8NEC5 780 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 DTNBP1Q96EV8 351 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 MARK4Q96L34 752 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 CNBD2Q96M20 576 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 GPR22Q99680 433 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 C1QTNF1Q9BXJ1 281 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 UBE2OQ9C0C9 1292 aaKnown RBP15.9■□□□□ 0.14
NUP88-207ENST00000573584 GBA3Q9H227 469 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 EFCAB1Q9HAE3 211 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 VTI1BQ9UEU0 232 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 ANKRD6Q9Y2G4 727 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 PLXNA1Q9UIW2 1896 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 SMIM28A0A1B0GU29 152 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 STX16-NPEPL1H3BU86 382 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 NCAM2O15394 837 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 HUS1O60921 280 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 DDHD2O94830 711 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 SRGAP2BP0DMP2 458 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 NFKB1P19838 968 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 ME2P23368 584 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 AVPR1AP37288 418 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 ZBTB17Q13105 803 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 ARMC3Q5W041 872 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 NOTUMQ6P988 496 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 MAMDC4Q6UXC1 1216 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 LILRA2Q8N149 483 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 NPWQ8N729 165 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 ZNF560Q96MR9 790 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 HNRNPABQ99729 332 aaKnown RBP15.9■□□□□ 0.14
NUP88-207ENST00000573584 GOLGA2P5Q9HBQ8 144 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 ZSWIM8A7E2V4 1837 aa15.9■□□□□ 0.14
NUP88-207ENST00000573584 LTBP3Q9NS15 1303 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 SLCO1B7G3V0H7 640 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 JUNP05412 331 aaKnown RBP15.89■□□□□ 0.13
NUP88-207ENST00000573584 SPATA31D3P0C874 917 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 NPR3P17342 541 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 ADSLP30566 484 aaPredicted RBP15.89■□□□□ 0.13
NUP88-207ENST00000573584 RGS2P41220 211 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 PRKAA2P54646 552 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 RBM44Q6ZP01 1051 aaKnown RBP15.89■□□□□ 0.13
NUP88-207ENST00000573584 SPATA31D4Q6ZUB0 917 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 ZC3HC1Q86WB0 502 aaKnown RBP15.89■□□□□ 0.13
NUP88-207ENST00000573584 ADCY4Q8NFM4 1077 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 ZNF385DQ9H6B1 395 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 CDHR5Q9HBB8 845 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms