RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 FEM1AQ9BSK4 669 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 MUC3BQ9H195 1237 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 RSPH9Q9H1X1 276 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 L2HGDHQ9H9P8 463 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 TMEM9BQ9NQ34 198 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 MPP6Q9NZW5 540 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 SUSD2Q9UGT4 822 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 SCML1Q9UN30 329 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 SLC6A14Q9UN76 642 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 NCKAP1Q9Y2A7 1128 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 TBC1D30Q9Y2I9 924 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 BZW2Q9Y6E2 419 aaKnown RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 DNAH14Q0VDD8 3507 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 MED19A0JLT2 244 aaPredicted RBP9.31□□□□□ -0.92
NDE1-207ENST00000573203 SOWAHDA6NJG2 315 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 SIGLEC16A6NMB1 481 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 DRGXA6NNA5 263 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 METTL12A8MUP2 240 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 TMCO5BA8MYB1 307 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 DYNC1I1O14576 645 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 MID1O15344 667 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 CTIFO43310 598 aaKnown RBP9.31□□□□□ -0.92
NDE1-207ENST00000573203 SERPINF2P08697 491 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 ENGP17813 658 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 GPD1P21695 349 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 OR1E1P30953 314 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 ACSL1P33121 698 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 RFC1P35251 1148 aaPredicted RBP9.31□□□□□ -0.92
NDE1-207ENST00000573203 PTPN9P43378 593 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 MAPK8P45983 427 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 PSMD8P48556 350 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 CST6Q15828 149 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 UAP1L1Q3KQV9 507 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 ACCSLQ4AC99 568 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 RAB6CQ53S08 254 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 PPM1JQ5JR12 505 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 SH3PXD2AQ5TCZ1 1133 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 DCAF12L1Q5VU92 463 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 SFMBT2Q5VUG0 894 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 ACAD10Q6JQN1 1059 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 PPP1R2P3Q6NXS1 205 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 STRADAQ7RTN6 431 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 TFAP2DQ7Z6R9 452 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 SETD3Q86TU7 594 aaPredicted RBP9.31□□□□□ -0.92
NDE1-207ENST00000573203 MMAAQ8IVH4 418 aaKnown RBP9.31□□□□□ -0.92
NDE1-207ENST00000573203 ZNF683Q8IZ20 524 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 STK40Q8N2I9 435 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 FAM172AQ8WUF8 416 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 SNX19Q92543 992 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 PTPRN2Q92932 1015 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 ALG14Q96F25 216 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 GTPBP2Q9BX10 602 aaKnown RBP9.31□□□□□ -0.92
NDE1-207ENST00000573203 BTBD1Q9H0C5 482 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 RAB6CQ9H0N0 254 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 MIR1-1HGQ9H1L0 117 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 PCED1AQ9H1Q7 454 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 PABPC3Q9H361 631 aaKnown RBP9.31□□□□□ -0.92
NDE1-207ENST00000573203 HAUS4Q9H6D7 363 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 SGK2Q9HBY8 427 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 FSCN3Q9NQT6 498 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 FBXL12Q9NXK8 326 aa9.31□□□□□ -0.92
NDE1-207ENST00000573203 IGLV3-10A0A075B6K4 115 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 A0A1B0GTW7 788 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 A0A1W2PP55 124 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 CDX4O14627 284 aaPredicted RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 ATP9BO43861 1147 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 RNASEH2AO75792 299 aaKnown RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 SEMA4FO95754 770 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 ADH1BP00325 375 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 IL1BP01584 269 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 SYPP08247 313 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 VAV1P15498 845 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 DESP17661 470 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 SLC8A1P32418 973 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 ADRA1BP35368 520 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 TUBB4BP68371 445 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 KLHL30Q0D2K2 578 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 ELAVL3Q14576 367 aaKnown RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 DLG2Q15700 870 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 ASTE1Q2TB18 679 aaPredicted RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 RWDD4Q6NW29 188 aaKnown RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 DCUN1D2Q6PH85 259 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 USP30Q70CQ3 517 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 MCOLN2Q8IZK6 566 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 ZCCHC9Q8N567 271 aaKnown RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 ATP11CQ8NB49 1132 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 DNASE2BQ8WZ79 361 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 OR8D1Q8WZ84 308 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 CENPIQ92674 756 aaPredicted RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 MCEEQ96PE7 176 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 FAM129BQ96TA1 746 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 PSMB7Q99436 277 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 CHP1Q99653 195 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 OMDQ99983 421 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 ZYG11BQ9C0D3 744 aa9.3□□□□□ -0.92
NDE1-207ENST00000573203 C6orf106Q9H6K1 298 aaPredicted RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 NHEJ1Q9H9Q4 299 aaPredicted RBP9.3□□□□□ -0.92
NDE1-207ENST00000573203 CAPN10Q9HC96 672 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms