RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 C6orf118Q5T5N4 469 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 NAPEPLDQ6IQ20 393 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 CCDC114Q96M63 670 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 GBP4Q96PP9 640 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 ELF4Q99607 663 aaPredicted RBP17.75■□□□□ 0.43
LITAF-211ENST00000572255 SIK3Q9Y2K2 1263 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 DAAM1Q9Y4D1 1078 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 FARP1Q9Y4F1 1045 aaPredicted RBP17.75■□□□□ 0.43
LITAF-211ENST00000572255 WDFY3Q8IZQ1 3526 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 DOCK9Q9BZ29 2069 aa17.75■□□□□ 0.43
LITAF-211ENST00000572255 PLXNB3Q9ULL4 1909 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 GOLGA8CPA6NN73 597 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 SMAD6O43541 496 aaKnown RBP17.74■□□□□ 0.43
LITAF-211ENST00000572255 ENDOD1O94919 500 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 OR1E1P30953 314 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 MAT2AP31153 395 aaKnown RBP17.74■□□□□ 0.43
LITAF-211ENST00000572255 COPB1P53618 953 aaKnown RBP17.74■□□□□ 0.43
LITAF-211ENST00000572255 SYCP1Q15431 976 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 SLC45A4Q5BKX6 768 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 LINGO4Q6UY18 593 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 TRIM72Q6ZMU5 477 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 PHLDB2Q86SQ0 1253 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 PRPF39Q86UA1 669 aaKnown RBP17.74■□□□□ 0.43
LITAF-211ENST00000572255 OR7D4Q8NG98 312 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 OR2A12Q8NGT7 310 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 SLC30A5Q8TAD4 765 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 ZYG11BQ9C0D3 744 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 GDF3Q9NR23 364 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 ARHGAP20Q9P2F6 1191 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 ZNF212Q9UDV6 495 aa17.74■□□□□ 0.43
LITAF-211ENST00000572255 ZFHX4Q86UP3 3567 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 ILVBLA1L0T0 632 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 TLR4O00206 839 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 TNFSF14O43557 240 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 DKK1O94907 266 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 CTSLP07711 333 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 GLDCP23378 1020 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 CHRNA3P32297 505 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 NUDT1P36639 197 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 STAT1P42224 750 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 CLCN6P51797 869 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 NXPH1P58417 271 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 MYL5Q02045 173 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 SHBQ15464 509 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 RAB6CQ53S08 254 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 C22orf39Q6P5X5 142 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 SASS6Q6UVJ0 657 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 CCNI2Q6ZMN8 369 aaPredicted RBP17.73■□□□□ 0.43
LITAF-211ENST00000572255 ZNF783Q6ZMS7 281 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 TRIM69Q86WT6 500 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 GATAD2AQ86YP4 633 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 ANKRD20A12PQ8NF67 263 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 RXFP2Q8WXD0 754 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 PCMTD1Q96MG8 357 aaPredicted RBP17.73■□□□□ 0.43
LITAF-211ENST00000572255 C11orf70Q9BRQ4 267 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 SPON2Q9BUD6 331 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 RAB6CQ9H0N0 254 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 ANO10Q9NW15 660 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 LIMA1Q9UHB6 759 aaKnown RBP17.73■□□□□ 0.43
LITAF-211ENST00000572255 DMTF1Q9Y222 760 aa17.73■□□□□ 0.43
LITAF-211ENST00000572255 COL5A1P20908 1838 aaPredicted RBP17.72■□□□□ 0.43
LITAF-211ENST00000572255 SRRM3A6NNA2 597 aaPredicted RBP17.72■□□□□ 0.43
LITAF-211ENST00000572255 LGALS16A8MUM7 142 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 CBX4O00257 560 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 KPNA3O00505 521 aaPredicted RBP17.72■□□□□ 0.43
LITAF-211ENST00000572255 GJB6O95452 261 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 SDC4P31431 198 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 TAS2R38P59533 333 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 STX1AQ16623 288 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 CDO1Q16878 200 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 C15orf59Q2T9L4 293 aaPredicted RBP17.72■□□□□ 0.43
LITAF-211ENST00000572255 CCDC14Q49A88 953 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 PIP5KL1Q5T9C9 394 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 DRC7Q8IY82 874 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 MFSD2AQ8NA29 543 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 CHST14Q8NCH0 376 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 TMIEQ8NEW7 156 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 NEK11Q8NG66 645 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 JOSD2Q8TAC2 188 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 PCDHB18PQ96TA0 734 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 TNKS2Q9H2K2 1166 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 PREBQ9HCU5 417 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 PPARGC1AQ9UBK2 798 aaKnown RBP17.72■□□□□ 0.43
LITAF-211ENST00000572255 FTSJ1Q9UET6 329 aa17.72■□□□□ 0.43
LITAF-211ENST00000572255 FAM208BQ5VWN6 2430 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 C2CD4BA6NLJ0 364 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 YKT6O15498 198 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 ZMPSTE24O75844 475 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 PRNPP04156 253 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 ITGAVP06756 1048 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 UNGP13051 313 aaPredicted RBP17.71■□□□□ 0.43
LITAF-211ENST00000572255 ADRA1BP35368 520 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 GNA12Q03113 381 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 PTP4A2Q12974 167 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 ARL13BQ3SXY8 428 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 SETMARQ53H47 684 aaPredicted RBP17.71■□□□□ 0.43
LITAF-211ENST00000572255 RETSATQ6NUM9 610 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 GRIN3AQ8TCU5 1115 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 SAP25Q8TEE9 199 aa17.71■□□□□ 0.43
LITAF-211ENST00000572255 ARRDC3Q96B67 414 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms