RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 CYP8B1Q9UNU6 501 aa16.52■□□□□ 0.24
LITAF-210ENST00000571976 FARP1Q9Y4F1 1045 aaPredicted RBP16.52■□□□□ 0.24
LITAF-210ENST00000571976 CHD5Q8TDI0 1954 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 ZFHX2Q9C0A1 2572 aaPredicted RBP16.51■□□□□ 0.23
LITAF-210ENST00000571976 MCF2LO15068 1137 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 SMAD6O43541 496 aaKnown RBP16.51■□□□□ 0.23
LITAF-210ENST00000571976 IGLV3-19P01714 112 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 BCKDHBP21953 392 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 GJC1P36383 396 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 ARSEP51690 589 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 SFSWAPQ12872 951 aaKnown RBP16.51■□□□□ 0.23
LITAF-210ENST00000571976 SERINC3Q13530 473 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 PDK2Q15119 407 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 CST6Q15828 149 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 ATP13A4Q4VNC1 1196 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 SPDYCQ5MJ68 293 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 Q6ZVU0 165 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 LPCAT2Q7L5N7 544 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 DSG4Q86SJ6 1040 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 CACUL1Q86Y37 369 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 MAP7D3Q8IWC1 876 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 STK40Q8N2I9 435 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 FRMD1Q8N878 549 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 KCTD6Q8NC69 237 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 TSC1Q92574 1164 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 RUBCNQ92622 972 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 HMCESQ96FZ2 354 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 KLC2Q9H0B6 622 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 MBD1Q9UIS9 605 aaPredicted RBP16.51■□□□□ 0.23
LITAF-210ENST00000571976 GMEB2Q9UKD1 530 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 TFR2Q9UP52 801 aa16.51■□□□□ 0.23
LITAF-210ENST00000571976 REXO2Q9Y3B8 237 aaKnown RBP16.51■□□□□ 0.23
LITAF-210ENST00000571976 ARHGAP42A6NI28 874 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 BTNL10A8MVZ5 291 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 ALOX15BO15296 676 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 BUB1O43683 1085 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 BUB1BO60566 1050 aaPredicted RBP16.5■□□□□ 0.23
LITAF-210ENST00000571976 CD160O95971 181 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 RETP07949 1114 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 AMPD1P23109 780 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 IL4RP24394 825 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 CD6P30203 668 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 VAV2P52735 878 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 TTC31Q49AM3 519 aaPredicted RBP16.5■□□□□ 0.23
LITAF-210ENST00000571976 ZFYVE27Q5T4F4 411 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 LRRC38Q5VT99 294 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 AFMIDQ63HM1 303 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 PMS2CLQ68D20 193 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 C22orf39Q6P5X5 142 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 TMCO3Q6UWJ1 677 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 ALYREFQ86V81 257 aaKnown RBP16.5■□□□□ 0.23
LITAF-210ENST00000571976 MMAAQ8IVH4 418 aaKnown RBP16.5■□□□□ 0.23
LITAF-210ENST00000571976 TXLNBQ8N3L3 684 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 PCDH20Q8N6Y1 951 aaKnown RBP16.5■□□□□ 0.23
LITAF-210ENST00000571976 ACRBPQ8NEB7 543 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 CASKIN2Q8WXE0 1202 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 ISG20Q96AZ6 181 aaKnown RBP16.5■□□□□ 0.23
LITAF-210ENST00000571976 CELF6Q96J87 481 aaKnown RBP16.5■□□□□ 0.23
LITAF-210ENST00000571976 ZNF670Q9BS34 389 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 CALN1Q9BXU9 219 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 SLC39A8Q9C0K1 460 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 CD93Q9NPY3 652 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 NCDNQ9UBB6 729 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 PLXND1Q9Y4D7 1925 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 USP34Q70CQ2 3546 aa16.5■□□□□ 0.23
LITAF-210ENST00000571976 RCCD1A6NED2 376 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 PJA2O43164 708 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 SPOPO43791 374 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 BNIP3LO60238 219 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 NDUFS2O75306 463 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 ADH1BP00325 375 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 IL1BP01584 269 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 CD48P09326 243 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 C5AR1P21730 350 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 COMTP21964 271 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 SLC8A1P32418 973 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 RECQLP46063 649 aaPredicted RBP16.49■□□□□ 0.23
LITAF-210ENST00000571976 PAPOLAP51003 745 aaKnown RBP16.49■□□□□ 0.23
LITAF-210ENST00000571976 RPL6Q02878 288 aaKnown RBP16.49■□□□□ 0.23
LITAF-210ENST00000571976 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 INO80DQ53TQ3 878 aaPredicted RBP16.49■□□□□ 0.23
LITAF-210ENST00000571976 FAM46CQ5VWP2 391 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 USP30Q70CQ3 517 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 KIAA1328Q86T90 577 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 ARHGAP12Q8IWW6 846 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 RHOT1Q8IXI2 618 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 PLPP6Q8IY26 295 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 NPWQ8N729 165 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 CCDC112Q8NEF3 446 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 OR2A12Q8NGT7 310 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 TOE1Q96GM8 510 aaKnown RBP16.49■□□□□ 0.23
LITAF-210ENST00000571976 TNKS2Q9H2K2 1166 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 PABPC3Q9H361 631 aaKnown RBP16.49■□□□□ 0.23
LITAF-210ENST00000571976 WSB2Q9NYS7 404 aaPredicted RBP16.49■□□□□ 0.23
LITAF-210ENST00000571976 PPM1HQ9ULR3 514 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 NCKAP1Q9Y2A7 1128 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 ALG6Q9Y672 507 aa16.49■□□□□ 0.23
LITAF-210ENST00000571976 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.48■□□□□ 0.23
LITAF-210ENST00000571976 MID1O15344 667 aa16.48■□□□□ 0.23
LITAF-210ENST00000571976 PRAMEF11O60813 436 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms