RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TFAP2CQ92754 450 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 PPWD1Q96BP3 646 aaKnown RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 ATXN7L3BQ96GX2 97 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 MPHOSPH6Q99547 160 aaKnown RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 SLC29A1Q99808 456 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 ACE2Q9BYF1 805 aaPredicted RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 NIFKQ9BYG3 293 aaKnown RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 DHX35Q9H5Z1 703 aaKnown RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 PICK1Q9NRD5 415 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 PIH1D1Q9NWS0 290 aaKnown RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 ZNF70Q9UC06 446 aaPredicted RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 HMGXB4Q9UGU5 601 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 PAPSS1O43252 624 aaPredicted RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 TIMM44O43615 452 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 RGS20O76081 388 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 TFPTP0C1Z6 253 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 BCAP31P51572 246 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 MAPRE2Q15555 327 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 SMAD1Q15797 465 aaKnown RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 IRAK1BP1Q5VVH5 260 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 FASTKD5Q7L8L6 764 aaKnown RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 ZNF786Q8N393 782 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 PACRGLQ8N7B6 248 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 ANKFN1Q8N957 763 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 PIWIL1Q96J94 861 aaKnown RBP15.67■□□□□ 0.1
SMG6-207ENST00000570756 CYP3A43Q9HB55 503 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 RNF146Q9NTX7 359 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 PCDHGA7Q9Y5G6 932 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 FADS3Q9Y5Q0 445 aa15.67■□□□□ 0.1
SMG6-207ENST00000570756 TCRBV3S1A0A5B6 114 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 F5H423 210 aaPredicted RBP15.66■□□□□ 0.1
SMG6-207ENST00000570756 C2P06681 752 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 HALP42357 657 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 PRAMEP78395 509 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 IRF9Q00978 393 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 NSUN2Q08J23 767 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMG6-207ENST00000570756 ZNF354CQ86Y25 554 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 NOL11Q9H8H0 719 aaKnown RBP15.66■□□□□ 0.1
SMG6-207ENST00000570756 CXorf21Q9HAI6 301 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 GBA2Q9HCG7 927 aaPredicted RBP15.66■□□□□ 0.1
SMG6-207ENST00000570756 CDC14AQ9UNH5 594 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 MYO18AQ92614 2054 aaKnown RBP15.66■□□□□ 0.1
SMG6-207ENST00000570756 TRPC5OSA6NMA1 111 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 CABYRO75952 493 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 MARK4Q96L34 752 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 DOK1Q99704 481 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 PCDHAC1Q9H158 963 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 UPF3AQ9H1J1 476 aaKnown RBP15.66■□□□□ 0.1
SMG6-207ENST00000570756 LRRC40Q9H9A6 602 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 DUS2Q9NX74 493 aaKnown RBP15.66■□□□□ 0.1
SMG6-207ENST00000570756 DTLQ9NZJ0 730 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 ZDHHC2Q9UIJ5 367 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 GNPTGQ9UJJ9 305 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 ANKRD6Q9Y2G4 727 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 COL4A5P29400 1685 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 CROCCQ5TZA2 2017 aa15.66■□□□□ 0.1
SMG6-207ENST00000570756 CNTNAP1P78357 1384 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 PTPRFP10586 1907 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 TMEM247A6NEH6 219 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 NFKBIEO00221 500 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 NOL3O60936 208 aaKnown RBP15.65■□□□□ 0.1
SMG6-207ENST00000570756 ZBTB11O95625 1053 aaPredicted RBP15.65■□□□□ 0.1
SMG6-207ENST00000570756 PRKCBP05771 671 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 BMP2P12643 396 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 DCKP27707 260 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 HADHAP40939 763 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 NME5P56597 212 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 KIZQ2M2Z5 673 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 GLRA4Q5JXX5 417 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 NIPAL1Q6NVV3 410 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 PTAR1Q7Z6K3 402 aaPredicted RBP15.65■□□□□ 0.1
SMG6-207ENST00000570756 ZBTB8OSQ8IWT0 167 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 CENPSQ8N2Z9 138 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMG6-207ENST00000570756 TBC1D15Q8TC07 691 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 LPGAT1Q92604 370 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 TCF12Q99081 682 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 TASP1Q9H6P5 420 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 RPF2Q9H7B2 306 aaKnown RBP15.65■□□□□ 0.1
SMG6-207ENST00000570756 SPAG4Q9NPE6 437 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 CNOT6Q9ULM6 557 aaKnown RBP15.65■□□□□ 0.1
SMG6-207ENST00000570756 DOLKQ9UPQ8 538 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 TMED5Q9Y3A6 229 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 SOBPA7XYQ1 873 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 SPATA31C2B4DYI2 1134 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 E7ENX8 843 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 H3BMQ9 156 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 PLOD2O00469 737 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 IL18RAPO95256 599 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 ATE1O95260 518 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 ALDH2P05091 517 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 FUT4P22083 530 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 MYF6P23409 242 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 CD151P48509 253 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 MOGQ16653 247 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 LCLAT1Q6UWP7 414 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 CES3Q6UWW8 571 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 CHSY3Q70JA7 882 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 LYSMD3Q7Z3D4 306 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 PCDH20Q8N6Y1 951 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms