RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 NPDC1Q9NQX5 325 aaPredicted RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 FAM86C1Q9NVL1 165 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 PPP1R14DQ9NXH3 145 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 PCDHGA3Q9Y5H0 932 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 PHIPQ8WWQ0 1821 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 hCG_1809904A0A1W2PP81 198 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 A0A1W2PPE2 198 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 A0A1W2PR64 198 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 FAM86B1E9PN63 330 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 TAF4O00268 1085 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 CHUKO15111 745 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 GMNNO75496 209 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 RFPL1O75677 317 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 GCNT3O95395 438 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 ADH1CP00326 375 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 APODP05090 189 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 FAM86B2P0C5J1 330 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 DHRS4L1P0CG22 281 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 NOS3P29474 1203 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 TRIM23P36406 574 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 FXR1P51114 621 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMG1-217ENST00000569764 GPC3P51654 580 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 ADAM17P78536 824 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 SIGLEC14Q08ET2 396 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 STK4Q13043 487 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 SQLEQ14534 574 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 PON2Q15165 354 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 SEZ6Q53EL9 994 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 GLE1Q53GS7 698 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 CFAP157Q5JU67 520 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 FOXB2Q5VYV0 432 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 POC1BQ8TC44 478 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 PDGFCQ9NRA1 345 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 ZFP57Q9NU63 452 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 MOCS1Q9NZB8 636 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 DOLKQ9UPQ8 538 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 SBF1O95248 1867 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 MKI67P46013 3256 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 MED7O43513 233 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 FZD6O60353 706 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 ENO2P09104 434 aaPredicted RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 EEF1GP26641 437 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 DHPSP49366 369 aaPredicted RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 GBX1Q14549 363 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 WHAMMP3Q1A5X7 153 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 THEMIS2Q5TEJ8 643 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 CDKAL1Q5VV42 579 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 RPUSD3Q6P087 351 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 SPATA24Q86W54 205 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 GBP5Q96PP8 586 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 SNTG1Q9NSN8 517 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 DNAJB9Q9UBS3 223 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 CTNND2Q9UQB3 1225 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 RPH3AQ9Y2J0 694 aaPredicted RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 PCDHB2Q9Y5E7 798 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 STX16-NPEPL1H3BU86 382 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 TRDMT1O14717 391 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 SNPHO15079 494 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 PRPSAP2O60256 369 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 ENDOD1O94919 500 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 GNA14O95837 355 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 LTFP02788 710 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 NCF1P14598 390 aaPredicted RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 LRPAP1P30533 357 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 RFC1P35251 1148 aaPredicted RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 GRIK1P39086 918 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 PITPNBP48739 271 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 ADKP55263 362 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 TFAMQ00059 246 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 CCDC62Q6P9F0 684 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 BNIPLQ7Z465 357 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 USP13Q92995 863 aaPredicted RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 PRPF18Q99633 342 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 TTLL2Q9BWV7 592 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 C1QTNF7Q9BXJ2 289 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 PAIP1Q9H074 479 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 ATXN3LQ9H3M9 355 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 HACD3Q9P035 362 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 TELO2Q9Y4R8 837 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 SNX13Q9Y5W8 968 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 DOCK5Q9H7D0 1870 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 NPHP3-ACAD11A0A0J9YXS1 232 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 KANSL1LA0AUZ9 987 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 E7ENQ6 273 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 FMO6PO60774 539 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 JMJD7P0C870 316 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 TPBGLP0DKB5 382 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 LPIN1Q14693 890 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 MTF1Q14872 753 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 NR1I3Q14994 352 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 TCEAL5Q5H9L2 206 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 EOGTQ5NDL2 527 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 GDF6Q6KF10 455 aaPredicted RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 BORAQ6PGQ7 559 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 PRR23CQ6ZRP0 262 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 KRT74Q7RTS7 529 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 SIX6OS1Q8N1H7 587 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 KIAA0895Q8NCT3 520 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 VN1R2Q8NFZ6 395 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms