RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 HTR3DQ70Z44 454 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 SETD3Q86TU7 594 aaPredicted RBP7.8□□□□□ -1.16
CDH13-214ENST00000569455 RBM23Q86U06 439 aaKnown RBP7.8□□□□□ -1.16
CDH13-214ENST00000569455 ZBED8Q8IZ13 594 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 BBS5Q8N3I7 341 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 CPXM2Q8N436 756 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 ATP11CQ8NB49 1132 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 SMRP1Q8NCR6 262 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 VN1R2Q8NFZ6 395 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 SHKBP1Q8TBC3 707 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 PYROXD1Q8WU10 500 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 DEPDC1BQ8WUY9 529 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 SMG7Q92540 1137 aaKnown RBP7.8□□□□□ -1.16
CDH13-214ENST00000569455 LRRC39Q96DD0 335 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 TMA16Q96EY4 203 aaKnown RBP7.8□□□□□ -1.16
CDH13-214ENST00000569455 MSLNLQ96KJ4 702 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 ZFRQ96KR1 1074 aaKnown RBP7.8□□□□□ -1.16
CDH13-214ENST00000569455 TEKT5Q96M29 485 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 AGAP3Q96P47 875 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 SLC22A12Q96S37 553 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 IL12RB2Q99665 862 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 SLC46A2Q9BY10 475 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 GBA3Q9H227 469 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 IGFLR1Q9H665 355 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 NDFIP2Q9NV92 336 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 DNAJC17Q9NVM6 304 aaKnown RBP7.8□□□□□ -1.16
CDH13-214ENST00000569455 HCFC1R1Q9NWW0 138 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 CLDND1Q9NY35 253 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 FAM53CQ9NYF3 392 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 NINJ2Q9NZG7 142 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 CLEC1BQ9P126 229 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 CFAP97Q9P2B7 532 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 DNMT3BQ9UBC3 853 aaKnown RBP7.8□□□□□ -1.16
CDH13-214ENST00000569455 ZNF212Q9UDV6 495 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 CD207Q9UJ71 328 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 AAR2Q9Y312 384 aaKnown RBP7.8□□□□□ -1.16
CDH13-214ENST00000569455 NUP210Q8TEM1 1887 aaPredicted RBP7.8□□□□□ -1.16
CDH13-214ENST00000569455 CFAP54Q96N23 3096 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 MIA3Q5JRA6 1907 aa7.8□□□□□ -1.16
CDH13-214ENST00000569455 NOTCH4Q99466 2003 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 A0A087WUV0 522 aaPredicted RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 CCDC195A0A1B0GUA6 201 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 TCRBV7S3A2A0A539 114 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 E2F8A0AVK6 867 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ILVBLA1L0T0 632 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 LEFTY2O00292 366 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ZBTB24O43167 697 aaPredicted RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 TSPAN3O60637 253 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 SPAG6O75602 509 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ANXA9O76027 345 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ACSL3O95573 720 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 GLP2RO95838 553 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 CYBBP04839 570 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 RHOCP08134 193 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 MYZAPP0CAP1 466 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 GJA1P17302 382 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 NFKB1P19838 968 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 PSMB4P28070 264 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 OAS2P29728 719 aaKnown RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 MTHFRP42898 656 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 IFNAR2P48551 515 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 OXCT1P55809 520 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 RPS24P62847 133 aaKnown RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 ZNF844Q08AG5 666 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ZBTB17Q13105 803 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 SMAD4Q13485 552 aaKnown RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 SERINC3Q13530 473 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 STAT4Q14765 748 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 TEAD2Q15562 447 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 KYNUQ16719 465 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 KRT71Q3SY84 523 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 MPPE1Q53F39 396 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ATAT1Q5SQI0 421 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 TMCO4Q5TGY1 634 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 MARC1Q5VT66 337 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 NAPEPLDQ6IQ20 393 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ARHGAP36Q6ZRI8 547 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 GRASPQ7Z6J2 395 aaPredicted RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 GPR149Q86SP6 731 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 LINC00523Q86TU6 105 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 CIR1Q86X95 450 aaPredicted RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 FAM217AQ8IXS0 508 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 PALM2Q8IXS6 379 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 CMTM8Q8IZV2 173 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 GJD3Q8N144 294 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 CFAP52Q8N1V2 620 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 PDCD7Q8N8D1 485 aaKnown RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 USP33Q8TEY7 942 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 MAML1Q92585 1016 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ARHGEF2Q92974 986 aaKnown RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 HMCESQ96FZ2 354 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 C9orf72Q96LT7 481 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 RIPOR3Q96MK2 946 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 PRICKLE1Q96MT3 831 aaPredicted RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 PWWP2AQ96N64 755 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ZNF599Q96NL3 588 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 SERPINB12Q96P63 405 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 FCRL5Q96RD9 977 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 SH3GL2Q99962 352 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 CEP41Q9BYV8 373 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms