RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 PITRM1Q5JRX3 1037 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 ACBD5Q5T8D3 534 aaPredicted RBP9.63□□□□□ -0.87
UBR1-210ENST00000569337 RNF219Q5W0B1 726 aaPredicted RBP9.63□□□□□ -0.87
UBR1-210ENST00000569337 LYSMD4Q5XG99 296 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 AADACL2Q6P093 401 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 LRRC31Q6UY01 552 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 ERMP1Q7Z2K6 904 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 DGLUCYQ7Z3D6 616 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 POLNQ7Z5Q5 900 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 CIR1Q86X95 450 aaPredicted RBP9.63□□□□□ -0.87
UBR1-210ENST00000569337 SYT12Q8IV01 421 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 RHOT1Q8IXI2 618 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 OR2T3Q8NH03 318 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 FAM71BQ8TC56 605 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 TEKT4Q8WW24 435 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 TSC1Q92574 1164 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 IGSF8Q969P0 613 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 ALS2CR12Q96Q35 445 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 HAPLN3Q96S86 360 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 NCAPGQ9BPX3 1015 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 RTKNQ9BST9 563 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 OSBPL2Q9H1P3 480 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 DHX35Q9H5Z1 703 aaKnown RBP9.63□□□□□ -0.87
UBR1-210ENST00000569337 FBRSQ9HAH7 460 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 CD93Q9NPY3 652 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.63□□□□□ -0.87
UBR1-210ENST00000569337 OR12D3Q9UGF7 316 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 VANGL2Q9ULK5 521 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 AP4E1Q9UPM8 1137 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 NEU3Q9UQ49 428 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 MYO18AQ92614 2054 aaKnown RBP9.63□□□□□ -0.87
UBR1-210ENST00000569337 SHROOM3Q8TF72 1996 aa9.63□□□□□ -0.87
UBR1-210ENST00000569337 OTOGLQ3ZCN5 2332 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 WDR87Q6ZQQ6 2873 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 KIAA1549LQ6ZVL6 1849 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 CLDN11O75508 207 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 LRIG2O94898 1065 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 SRPRAP08240 638 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 KRT7P08729 469 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 ITPKAP23677 461 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 KDELR1P24390 212 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 OXTRP30559 389 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 TPMTP51580 245 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 AIF1P55008 147 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 CDH4P55283 916 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 ETF1P62495 437 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 SULT2A1Q06520 285 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 ZNF211Q13398 564 aaPredicted RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 DPYSL3Q14195 570 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 LLGL1Q15334 1064 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 HADHQ16836 314 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 PLEKHG6Q3KR16 790 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 ARL13BQ3SXY8 428 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 C5orf22Q49AR2 442 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 PPP6R3Q5H9R7 873 aaPredicted RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 SYCP2LQ5T4T6 812 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 MANEALQ5VSG8 457 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 IL31Q6EBC2 164 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 TCEAL6Q6IPX3 200 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 MFSD7Q6UXD7 560 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 SYT10Q6XYQ8 523 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 CACUL1Q86Y37 369 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 PSTKQ8IV42 348 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 KATNAL2Q8IYT4 538 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 RGL4Q8IZJ4 473 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 APCDD1Q8J025 514 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 KDM1BQ8NB78 822 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 FOXJ1Q92949 421 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 TCEAL3Q969E4 200 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 RNF25Q96BH1 459 aaPredicted RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 TOE1Q96GM8 510 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 RPL10LQ96L21 214 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 C1orf74Q96LT6 269 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 C16orf45Q96MC5 204 aaPredicted RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 HSPA12BQ96MM6 686 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 HERPUD2Q9BSE4 406 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 NUSAP1Q9BXS6 441 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 PCDH18Q9HCL0 1135 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 PRSS16Q9NQE7 514 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 RXFP3Q9NSD7 469 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 TMEM74BQ9NUR3 256 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 WSB2Q9NYS7 404 aaPredicted RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 CWC15Q9P013 229 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 USP36Q9P275 1121 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 ERVW-1Q9UQF0 538 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 GVINP1Q7Z2Y8 2422 aa9.62□□□□□ -0.87
UBR1-210ENST00000569337 NYNRINQ9P2P1 1898 aaKnown RBP9.62□□□□□ -0.87
UBR1-210ENST00000569337 IGLV3-10A0A075B6K4 115 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 DCDC2BA2VCK2 349 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 DRGXA6NNA5 263 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 TTC34A8MYJ7 566 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 PATE3B3GLJ2 98 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 SLC30A4O14863 429 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 CREB3O43889 395 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 RNASEH1O60930 286 aaKnown RBP9.61□□□□□ -0.87
UBR1-210ENST00000569337 SRGAP2O75044 1071 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 CNTN5O94779 1100 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 DNTTP04053 509 aa9.61□□□□□ -0.87
UBR1-210ENST00000569337 KRT1P04264 644 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms