RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 EGFP01133 1207 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 ATP1A1P05023 1023 aaKnown RBP16.38■□□□□ 0.21
USB1-215ENST00000569252 CXCR5P32302 372 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 PAPOLAP51003 745 aaKnown RBP16.38■□□□□ 0.21
USB1-215ENST00000569252 SEC13P55735 322 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 SPEM2Q0P670 501 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 PDK1Q15118 436 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 LONRF2Q1L5Z9 754 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 NCBP2-AS2Q69YL0 99 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 SLC9A4Q6AI14 798 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 SYT10Q6XYQ8 523 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 KIAA0907Q7Z7F0 614 aaPredicted RBP16.38■□□□□ 0.21
USB1-215ENST00000569252 METTL3Q86U44 580 aaKnown RBP16.38■□□□□ 0.21
USB1-215ENST00000569252 APCDD1Q8J025 514 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 ZNF687Q8N1G0 1237 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 ATPAF2Q8N5M1 289 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 PQLC3Q8N755 202 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 PLD5Q8N7P1 536 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 CCNYQ8ND76 341 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 OR7D4Q8NG98 312 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 TTC17Q96AE7 1141 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 P2RY11Q96G91 374 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 C16orf45Q96MC5 204 aaPredicted RBP16.38■□□□□ 0.21
USB1-215ENST00000569252 SP110Q9HB58 689 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 FBRSL1Q9HCM7 1045 aaKnown RBP16.38■□□□□ 0.21
USB1-215ENST00000569252 ETNK2Q9NVF9 386 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 HAUS2Q9NVX0 235 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 C2orf42Q9NWW7 574 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 ZSCAN32Q9NX65 697 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.38■□□□□ 0.21
USB1-215ENST00000569252 SNX12Q9UMY4 172 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 NEU3Q9UQ49 428 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 STARD13Q9Y3M8 1113 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 SAR1BQ9Y6B6 198 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 USP24Q9UPU5 2620 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 CFAP47Q6ZTR5 3102 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 ZBTB24O43167 697 aaPredicted RBP16.37■□□□□ 0.21
USB1-215ENST00000569252 SRPRAP08240 638 aaKnown RBP16.37■□□□□ 0.21
USB1-215ENST00000569252 DLDP09622 509 aaKnown RBP16.37■□□□□ 0.21
USB1-215ENST00000569252 TDGF1P13385 188 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 PRLRP16471 622 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 ACVRL1P37023 503 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 MRPS21P82921 87 aaKnown RBP16.37■□□□□ 0.21
USB1-215ENST00000569252 ZNF528Q3MIS6 628 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 ACCSLQ4AC99 568 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 FNDC3BQ53EP0 1204 aaKnown RBP16.37■□□□□ 0.21
USB1-215ENST00000569252 FSTL4Q6MZW2 842 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 TIGD7Q6NT04 549 aaPredicted RBP16.37■□□□□ 0.21
USB1-215ENST00000569252 BBS12Q6ZW61 710 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 ADIPOR2Q86V24 386 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 BBS5Q8N3I7 341 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 DCAF4L2Q8NA75 395 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 ATP11CQ8NB49 1132 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 ZNF592Q92610 1267 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 CLDN23Q96B33 292 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 HAUS1Q96CS2 278 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 HMCESQ96FZ2 354 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 WDR24Q96S15 920 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 OSBPL9Q96SU4 736 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 ACE2Q9BYF1 805 aaPredicted RBP16.37■□□□□ 0.21
USB1-215ENST00000569252 OSBPL6Q9BZF3 934 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 BRD8Q9H0E9 1235 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 LRRC19Q9H756 370 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 PRMT8Q9NR22 394 aaPredicted RBP16.37■□□□□ 0.21
USB1-215ENST00000569252 ZNF212Q9UDV6 495 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 RALYQ9UKM9 306 aaKnown RBP16.37■□□□□ 0.21
USB1-215ENST00000569252 PCDHGA2Q9Y5H1 932 aa16.37■□□□□ 0.21
USB1-215ENST00000569252 KIF26AQ9ULI4 1882 aaPredicted RBP16.36■□□□□ 0.21
USB1-215ENST00000569252 PRRT4C9JH25 899 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 K7EQS6 105 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 CES2O00748 559 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 KCNA4P22459 653 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 TIE1P35590 1138 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 PAFAH1B1P43034 410 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 SATB1Q01826 763 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 SERINC3Q13530 473 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 GAS6Q14393 721 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 FUT11Q495W5 492 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 C2orf27AQ580R0 203 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 ARTNQ5T4W7 220 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 NAIF1Q69YI7 327 aaPredicted RBP16.36■□□□□ 0.21
USB1-215ENST00000569252 SLC13A5Q86YT5 568 aaPredicted RBP16.36■□□□□ 0.21
USB1-215ENST00000569252 CHPFQ8IZ52 775 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 PHTF2Q8N3S3 785 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 ZNF513Q8N8E2 541 aaPredicted RBP16.36■□□□□ 0.21
USB1-215ENST00000569252 CYB5D2Q8WUJ1 264 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 NELL1Q92832 810 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 LMLNQ96KR4 655 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 HOMER3Q9NSC5 361 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 RBM12Q9NTZ6 932 aaKnown RBP16.36■□□□□ 0.21
USB1-215ENST00000569252 SUN2Q9UH99 717 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 IPO11Q9UI26 975 aaKnown RBP16.36■□□□□ 0.21
USB1-215ENST00000569252 ERVW-1Q9UQF0 538 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 MYOFQ9NZM1 2061 aa16.36■□□□□ 0.21
USB1-215ENST00000569252 CACNA1GO43497 2377 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 CXorf51AA0A1B0GTR3 108 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 H7C0C1 242 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 APOC4-APOC2K7ER74 178 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 MFSD11O43934 449 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms