RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	ZBTB16	Q05516	673 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	SF3A3	Q12874	501 aa	Known RBP eCLIP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	PLCB4	Q15147	1175 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	ZRSR1	Q15695	479 aa	Known RBP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	ZNF672	Q499Z4	452 aa	Predicted RBP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	EFHC1	Q5JVL4	640 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	LCE3C	Q5T5A8	94 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM171A1	Q5VUB5	890 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	NCAPH2	Q6IBW4	605 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	TMEM71	Q6P5X7	295 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC30A9	Q6PML9	568 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	KSR2	Q6VAB6	950 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	TEX45	Q8NA69	505 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	CMAS	Q8NFW8	434 aa	Predicted RBP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	SGCZ	Q96LD1	299 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	MYD88	Q99836	296 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	SORBS1	Q9BX66	1292 aa	Known RBP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC22A11	Q9NSA0	550 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC39A10	Q9ULF5	831 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	OSGIN2	Q9Y236	505 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	SRPRB	Q9Y5M8	271 aa	Known RBP	3.64	□□□□□ -1.83
UBR1-209	ENST00000569243	KIF26B	Q2KJY2	2108 aa		3.64	□□□□□ -1.83
UBR1-209	ENST00000569243		A0A0B4J293	547 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	LOC102724159	A0A0B4J2E5	919 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	LDB2	O43679	373 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	KCNJ13	O60928	360 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	TMCC1	O94876	653 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	MMP3	P08254	477 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	SNRNP70	P08621	437 aa	Known RBP	3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	NAGA	P17050	411 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	PDLIM4	P50479	330 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	PMS2	P54278	862 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	PWP2	Q15269	919 aa	Known RBP	3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	ZNF718	Q3SXZ3	478 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	ARL13A	Q5H913	290 aa	Predicted RBP	3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	LRRC57	Q8N9N7	239 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC2A12	Q8TD20	617 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	CLEC4C	Q8WTT0	213 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	EID2B	Q96D98	161 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	PRPF18	Q99633	342 aa	Known RBP	3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	ZNF700	Q9H0M5	742 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243		Q9N2J8	555 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	ARL15	Q9NXU5	204 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	IGSF9	Q9P2J2	1179 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC45A1	Q9Y2W3	748 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	RAP2C	Q9Y3L5	183 aa		3.63	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM90A18P	A6NE21	464 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM90A16P	A6NEW6	464 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM90A9P	A6NNJ1	464 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM90A5P	A8MXJ8	464 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	DNPH1	O43598	174 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	DDN	O94850	711 aa	Predicted RBP	3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	UMOD	P07911	640 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	MYL3	P08590	195 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM90A15P	P0C7V4	464 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	FAM90A14P	P0C7W9	464 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	TCEA1	P23193	301 aa	Known RBP	3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	PRPH2	P23942	346 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	TAF6	P49848	677 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	RCAN1	P53805	252 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	DLX5	P56178	289 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	EEF1A2	Q05639	463 aa	Known RBP	3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	HNF4G	Q14541	408 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	HORMAD2	Q8N7B1	307 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	TMEM217	Q8N7C4	229 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	KIAA1191	Q96A73	305 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	TMEM41A	Q96HV5	264 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	TNIP3	Q96KP6	325 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	APOLD1	Q96LR9	279 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	FIZ1	Q96SL8	496 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	SLC25A33	Q9BSK2	321 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	MECR	Q9BV79	373 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	IL25	Q9H293	177 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	CHST12	Q9NRB3	414 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	TMEM248	Q9NWD8	314 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	SEL1L	Q9UBV2	794 aa		3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	AGO1	Q9UL18	857 aa	Known RBP	3.62	□□□□□ -1.83
UBR1-209	ENST00000569243	IGHV4-28	A0A0C4DH34	117 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	TCRBV7S3A2	A0A539	114 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	PLSCR5	A0PG75	271 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	GOLGA6L3	A6NEY3	463 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	HSPB6	O14558	160 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	PIP5K1B	O14986	540 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	PPP3CC	P48454	512 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	CXCR3	P49682	368 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	CDH12	P55289	794 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	ILF3	Q12906	894 aa	Known RBP eCLIP	3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	TRAF3	Q13114	568 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	ALKBH1	Q13686	389 aa	Known RBP	3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	CCDC6	Q16204	474 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	ZNF284	Q2VY69	593 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	KRTAP24-1	Q3LI83	254 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	AADACL2	Q6P093	401 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	MON1B	Q7L1V2	547 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	PATL1	Q86TB9	770 aa	Known RBP	3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	TMC8	Q8IU68	726 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	CEP76	Q8TAP6	659 aa		3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	IPO4	Q8TEX9	1081 aa	Known RBP	3.61	□□□□□ -1.83
UBR1-209	ENST00000569243	HMGB4	Q8WW32	186 aa		3.61	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms