RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 CLDN11O75508 207 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 RHOCP08134 193 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 CDK4P11802 303 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 MYF5P13349 255 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 GLDCP23378 1020 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 VASPP50552 380 aaPredicted RBP15.91■□□□□ 0.14
NME3-211ENST00000568561 RNASE9P60153 205 aaKnown RBP15.91■□□□□ 0.14
NME3-211ENST00000568561 SLC6A3Q01959 620 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 KDM7AQ6ZMT4 941 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 GBP6Q6ZN66 633 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 SLC26A9Q7LBE3 791 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 TFAP2DQ7Z6R9 452 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 ATP11CQ8NB49 1132 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 TMEM145Q8NBT3 493 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 OR13H1Q8NG92 308 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 CALN1Q9BXU9 219 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 NRSN2Q9GZP1 204 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 TNKS2Q9H2K2 1166 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 SYNCQ9H7C4 482 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 PREBQ9HCU5 417 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 PCDHGC3Q9UN70 934 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 CLCA2Q9UQC9 943 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 HS3ST2Q9Y278 367 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 TBC1D30Q9Y2I9 924 aa15.91■□□□□ 0.14
NME3-211ENST00000568561 MAGEC1O60732 1142 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 ENDOD1O94919 500 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 ZIC2O95409 532 aaPredicted RBP15.9■□□□□ 0.14
NME3-211ENST00000568561 CHRNA3P32297 505 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 NUDT1P36639 197 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 SULT1E1P49888 294 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 CDH4P55283 916 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 CLDN2P57739 230 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 DAB2P98082 770 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 OVGP1Q12889 678 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 RTP5Q14D33 572 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 SEL1L3Q68CR1 1132 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 LRRC69Q6ZNQ3 347 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 TMC6Q7Z403 805 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 SLC47A2Q86VL8 602 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 OR2A12Q8NGT7 310 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 NOX5Q96PH1 765 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 PPP1R9BQ96SB3 815 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 TKTL2Q9H0I9 626 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 SIX2Q9NPC8 291 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 MPP6Q9NZW5 540 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 PCDHB1Q9Y5F3 818 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 MGAQ8IWI9 3026 aa15.9■□□□□ 0.14
NME3-211ENST00000568561 FLNBO75369 2602 aaKnown RBP15.89■□□□□ 0.13
NME3-211ENST00000568561 ZNF462Q96JM2 2506 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 A0A0D9SEW6 157 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 DGKAP23743 735 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 ACP1P24666 158 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 PON1P27169 355 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 NOS2P35228 1153 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 CLCN1P35523 988 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 CCDC173Q0VFZ6 552 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 KCNMA1Q12791 1236 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 ILKQ13418 452 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 EXOC3L4Q17RC7 722 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 ZNF284Q2VY69 593 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 C5orf22Q49AR2 442 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 ZNF542PQ5EBM4 170 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 C22orf39Q6P5X5 142 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 HORMAD1Q86X24 394 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 ZNF683Q8IZ20 524 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 SLC22A18ASQ8N1D0 253 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 DCBLD1Q8N8Z6 715 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 OR7D4Q8NG98 312 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 FCRL3Q96P31 734 aaPredicted RBP15.89■□□□□ 0.13
NME3-211ENST00000568561 UBL7Q96S82 380 aaPredicted RBP15.89■□□□□ 0.13
NME3-211ENST00000568561 NPY6RQ99463 290 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 C2orf49Q9BVC5 232 aaPredicted RBP15.89■□□□□ 0.13
NME3-211ENST00000568561 PRORYQ9H606 182 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 ARHGEF38Q9NXL2 777 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 DNAJC12Q9UKB3 198 aa15.89■□□□□ 0.13
NME3-211ENST00000568561 ZFR2Q9UPR6 939 aaKnown RBP15.89■□□□□ 0.13
NME3-211ENST00000568561 RRP8O43159 456 aaKnown RBP15.88■□□□□ 0.13
NME3-211ENST00000568561 PCDH8O95206 1070 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 FGFR1OPO95684 399 aaKnown RBP15.88■□□□□ 0.13
NME3-211ENST00000568561 MT-CO3P00414 261 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 KRT9P35527 623 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 CXCR3P49682 368 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 KRT83P78385 493 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 PTK2Q05397 1052 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 ZNF211Q13398 564 aaPredicted RBP15.88■□□□□ 0.13
NME3-211ENST00000568561 BECN1Q14457 450 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 C2CD6Q53TS8 623 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 ARSIQ5FYB1 569 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 GCNT7Q6ZNI0 430 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 IRF2BP1Q8IU81 584 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 ZNF397Q8NF99 534 aaPredicted RBP15.88■□□□□ 0.13
NME3-211ENST00000568561 OR4C6Q8NH72 309 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 SNIP1Q8TAD8 396 aaKnown RBP15.88■□□□□ 0.13
NME3-211ENST00000568561 RFFLQ8WZ73 363 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 FAM81BQ96LP2 452 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 CCDC114Q96M63 670 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 TBCBQ99426 244 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 WDCPQ9H6R7 721 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 DYRK4Q9NR20 520 aa15.88■□□□□ 0.13
NME3-211ENST00000568561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms