RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CEP44Q9C0F1 390 aa19.05■□□□□ 0.64
LINC01238-205ENST00000567549 EBF2Q9HAK2 575 aa19.05■□□□□ 0.64
LINC01238-205ENST00000567549 VPS51Q9UID3 782 aa19.05■□□□□ 0.64
LINC01238-205ENST00000567549 ANKRD11Q6UB99 2663 aaPredicted RBP19.04■□□□□ 0.64
LINC01238-205ENST00000567549 ADCY5O95622 1261 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 DESP17661 470 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 MAT2AP31153 395 aaKnown RBP19.04■□□□□ 0.64
LINC01238-205ENST00000567549 FKBP15Q5T1M5 1219 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 DHRS13Q6UX07 377 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 XYLT1Q86Y38 959 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 EID2Q8N6I1 236 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 TBCBQ99426 244 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 ZYG11BQ9C0D3 744 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 PLCB1Q9NQ66 1216 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 IL36AQ9UHA7 158 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 SARDHQ9UL12 918 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 GPSM3Q9Y4H4 160 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 KNTC1P50748 2209 aa19.04■□□□□ 0.64
LINC01238-205ENST00000567549 IGLV3-10A0A075B6K4 115 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 TRABD2BA6NFA1 517 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 RIOK3O14730 519 aaKnown RBP19.03■□□□□ 0.64
LINC01238-205ENST00000567549 ALPPL2P10696 532 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 CKMT2P17540 419 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 HNRNPA2B1P22626 353 aaKnown RBP19.03■□□□□ 0.64
LINC01238-205ENST00000567549 DPCR1Q3MIW9 517 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 MIIPQ5JXC2 388 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 C22orf39Q6P5X5 142 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 TRIM72Q6ZMU5 477 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 HORMAD1Q86X24 394 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 PCDH20Q8N6Y1 951 aaKnown RBP19.03■□□□□ 0.64
LINC01238-205ENST00000567549 OR2A12Q8NGT7 310 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 MDM1Q8TC05 714 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 HDAC8Q9BY41 377 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 ARHGAP20Q9P2F6 1191 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 PPARGC1AQ9UBK2 798 aaKnown RBP19.03■□□□□ 0.64
LINC01238-205ENST00000567549 HPCAL4Q9UM19 191 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 FHOD1Q9Y613 1164 aa19.03■□□□□ 0.64
LINC01238-205ENST00000567549 F8VZ95 297 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 CBX4O00257 560 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 TAF4O00268 1085 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 SRGAP2O75044 1071 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 CNTN5O94779 1100 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 PCDH8O95206 1070 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 GGCXP38435 758 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 NUMBP49757 651 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 NEK3P51956 506 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 E2F1Q01094 437 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 SYCP1Q15431 976 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 TCP11X2Q5H9J9 407 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 SFMBT2Q5VUG0 894 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 TAF3Q5VWG9 929 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 KIAA1161Q6NSJ0 714 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 ERN2Q76MJ5 926 aaKnown RBP19.02■□□□□ 0.64
LINC01238-205ENST00000567549 TFAP2DQ7Z6R9 452 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 C14orf80Q86SX3 495 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 OR52K2Q8NGK3 314 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 IFT43Q96FT9 208 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 ATP13A1Q9HD20 1204 aa19.02■□□□□ 0.64
LINC01238-205ENST00000567549 CACNA1GO43497 2377 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 NEMP2A6NFY4 417 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 GOLGA8SH3BPF8 625 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 THEGLP0DJG4 465 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 SDC4P31431 198 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 MAPKAPK2P49137 400 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 ACADVLP49748 655 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 CYP4F3Q08477 520 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 POM121L1PQ3SYA9 428 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 ALFQ53S48 1182 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 PRAMEF14Q5SWL7 426 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 FBXL19Q6PCT2 694 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 CACTIN-AS1Q8N1I8 211 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 ARHGEF26Q96DR7 871 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 LRIG1Q96JA1 1093 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 FEM1CQ96JP0 617 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 PSMB7Q99436 277 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 SPON2Q9BUD6 331 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 AJAP1Q9UKB5 411 aaPredicted RBP19.01■□□□□ 0.63
LINC01238-205ENST00000567549 ADAMTS20P59510 1910 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 DOCK4Q8N1I0 1966 aa19.01■□□□□ 0.63
LINC01238-205ENST00000567549 DMXL2Q8TDJ6 3036 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 ZZEF1O43149 2961 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 A0A1W2PQU0 124 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 ANKRD62A6NC57 917 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 A6NNZ2 444 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 SNAP91O60641 907 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 PNMA6AP0CW24 399 aaPredicted RBP19■□□□□ 0.63
LINC01238-205ENST00000567549 RRM1P23921 792 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 SERPINH1P50454 418 aaKnown RBP19■□□□□ 0.63
LINC01238-205ENST00000567549 IRAK1P51617 712 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 RPS21P63220 83 aaKnown RBP19■□□□□ 0.63
LINC01238-205ENST00000567549 NOMO3P69849 1222 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 DAB2P98082 770 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 CAMK2BQ13554 666 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 POLD3Q15054 466 aaPredicted RBP19■□□□□ 0.63
LINC01238-205ENST00000567549 SHBQ15464 509 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 PIP5KL1Q5T9C9 394 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 OTUD1Q5VV17 481 aaPredicted RBP19■□□□□ 0.63
LINC01238-205ENST00000567549 PLPP6Q8IY26 295 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 ZNF683Q8IZ20 524 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 EPS8L1Q8TE68 723 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms