RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 VPS45Q9NRW7 570 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 RRN3Q9NYV6 651 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 ZDHHC2Q9UIJ5 367 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 COPG1Q9Y678 874 aaKnown RBP15.95■□□□□ 0.14
COMMD4-215ENST00000566843 LOC285556D6RIA3 1793 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 GRIA4P48058 902 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 NDST2P52849 883 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 BACE1P56817 501 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 RHDQ02161 417 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 ITGA7Q13683 1181 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 PTK2BQ14289 1009 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 SMAD1Q15797 465 aaKnown RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 NRF1Q16656 503 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 KIZQ2M2Z5 673 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 IRAK1BP1Q5VVH5 260 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 BSPRYQ5W0U4 402 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 SCUBE3Q8IX30 993 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 DNERQ8NFT8 737 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 RMND5BQ96G75 393 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 C1QTNF1Q9BXJ1 281 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 TEX13BQ9BXU2 312 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 ANKRD60Q9BZ19 345 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 CAB39LQ9H9S4 337 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 TUBA8Q9NY65 449 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 RCOR3Q9P2K3 495 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 FAF1Q9UNN5 650 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 SLC8A2Q9UPR5 921 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 ANKRD6Q9Y2G4 727 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 PCDHGA7Q9Y5G6 932 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 MYO18AQ92614 2054 aaKnown RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 ZCWPW2A0A1B0GU75 182 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 ZBTB42B2RXF5 422 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 TIMM44O43615 452 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 STAG3L1P0CL83 205 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 ATXN3P54252 364 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 ATXN1P54253 815 aaKnown RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 PSME3P61289 254 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 PLOD1Q02809 727 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 TRAP1Q12931 704 aaKnown RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 PPP1R26Q5T8A7 1209 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 EXOC8Q8IYI6 725 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 LSMEM2Q8N112 164 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 LRRC71Q8N4P6 559 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 C12orf29Q8N999 325 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 GRIN3AQ8TCU5 1115 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 SNRNP27Q8WVK2 155 aaKnown RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 LRTOMTQ8WZ04 291 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 ZNF669Q96BR6 464 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 NPAS2Q99743 824 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 TMEM79Q9BSE2 394 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 ASB7Q9H672 318 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 CAAP1Q9H8G2 361 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 SARDHQ9UL12 918 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 HEMK1Q9Y5R4 338 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-215ENST00000566843 TANC1Q9C0D5 1861 aa15.94■□□□□ 0.14
COMMD4-215ENST00000566843 TCRBV3S1A0A5B6 114 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 MFSD11O43934 449 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 GOT1P17174 413 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 CCR10P46092 362 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 SNX16P57768 344 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 RAB15P59190 212 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 PDAP1Q13442 181 aaKnown RBP15.93■□□□□ 0.14
COMMD4-215ENST00000566843 FIBCD1Q8N539 461 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 CCDC185Q8N715 623 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 ADAMTS16Q8TE57 1224 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 SLCO4A1Q96BD0 722 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 TMA16Q96EY4 203 aaKnown RBP15.93■□□□□ 0.14
COMMD4-215ENST00000566843 ATXN7L3BQ96GX2 97 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 MAELQ96JY0 434 aaKnown RBP15.93■□□□□ 0.14
COMMD4-215ENST00000566843 PPP1R36Q96LQ0 422 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 AGAP2Q99490 1192 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 SLC29A1Q99808 456 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 CLK4Q9HAZ1 481 aaKnown RBP15.93■□□□□ 0.14
COMMD4-215ENST00000566843 CDH7Q9ULB5 785 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 TRIP11Q15643 1979 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 TMEM221A6NGB7 291 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 XPO1O14980 1071 aaKnown RBP15.93■□□□□ 0.14
COMMD4-215ENST00000566843 TRIM24O15164 1050 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 SLC7A1P30825 629 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 SCNN1AP37088 669 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 HADHAP40939 763 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 STT3AP46977 705 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 MBTD1Q05BQ5 628 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 CBX3Q13185 183 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 MTA1Q13330 715 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 KCTD21Q4G0X4 260 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 SLC26A9Q7LBE3 791 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 PATL1Q86TB9 770 aaKnown RBP15.93■□□□□ 0.14
COMMD4-215ENST00000566843 ZNF567Q8N184 647 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 FAM156AQ8NDB6 213 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 SEPT1Q8WYJ6 367 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 MOCOSQ96EN8 888 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 WRNIP1Q96S55 665 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 DNAI2Q9GZS0 605 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 UNC93B1Q9H1C4 597 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 HACD3Q9P035 362 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 HES2Q9Y543 173 aa15.93■□□□□ 0.14
COMMD4-215ENST00000566843 DICER1Q9UPY3 1922 aaKnown RBP15.92■□□□□ 0.14
COMMD4-215ENST00000566843 INO80B-WBP1J3KQ70 363 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms