RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 DMTF1Q9Y222 760 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 BTBD3Q9Y2F9 522 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 A0A0D9SEW6 157 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 A0A1W2PR77 199 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 PLK4O00444 970 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 EPHB6O15197 1021 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 YKT6O15498 198 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 MT-CO1P00395 513 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 CHRNB2P17787 502 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 SDC4P31431 198 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 ATP11AP98196 1134 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 ARL13BQ3SXY8 428 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 NAPEPLDQ6IQ20 393 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 TRIM69Q86WT6 500 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 EMC1Q8N766 993 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 NEK11Q8NG66 645 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 PCMTD1Q96MG8 357 aaPredicted RBP20.65■□□□□ 0.9
CLN6-207ENST00000566347 PREBQ9HCU5 417 aa20.65■□□□□ 0.9
CLN6-207ENST00000566347 PPARGC1AQ9UBK2 798 aaKnown RBP20.65■□□□□ 0.9
CLN6-207ENST00000566347 CHD6Q8TD26 2715 aa20.64■□□□□ 0.9
CLN6-207ENST00000566347 CFAP47Q6ZTR5 3102 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 LGALS16A8MUM7 142 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 TNFSF14O43557 240 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 PRNPP04156 253 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 RRM1P23921 792 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 CHRNA3P32297 505 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 NSFP46459 744 aaKnown RBP20.64■□□□□ 0.89
CLN6-207ENST00000566347 IL9RQ01113 521 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 SYCP1Q15431 976 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 POM121L1PQ3SYA9 428 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 RETSATQ6NUM9 610 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 OXR1Q8N573 874 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 MFSD2AQ8NA29 543 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 TMIEQ8NEW7 156 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 OR2A12Q8NGT7 310 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 SLC30A5Q8TAD4 765 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 RXFP2Q8WXD0 754 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 C11orf70Q9BRQ4 267 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 RETREG1Q9H6L5 497 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 TOR4AQ9NXH8 423 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 ZNF212Q9UDV6 495 aa20.64■□□□□ 0.89
CLN6-207ENST00000566347 SPEGQ15772 3267 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 ZZEF1O43149 2961 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 K7ERQ8 282 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 TLR4O00206 839 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 WNT9AO14904 365 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 MAGEC1O60732 1142 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 DKK1O94907 266 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 ATXN1LP0C7T5 689 aaKnown RBP20.63■□□□□ 0.89
CLN6-207ENST00000566347 UNGP13051 313 aaPredicted RBP20.63■□□□□ 0.89
CLN6-207ENST00000566347 CDK11BP21127 795 aaKnown RBP20.63■□□□□ 0.89
CLN6-207ENST00000566347 PTPN9P43378 593 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 RECQLP46063 649 aaPredicted RBP20.63■□□□□ 0.89
CLN6-207ENST00000566347 ARRB1P49407 418 aaPredicted RBP20.63■□□□□ 0.89
CLN6-207ENST00000566347 GSCP56915 257 aaPredicted RBP20.63■□□□□ 0.89
CLN6-207ENST00000566347 NXPH1P58417 271 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 NRG1Q02297 640 aaPredicted RBP20.63■□□□□ 0.89
CLN6-207ENST00000566347 SLC20A2Q08357 652 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 OVGP1Q12889 678 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 SETMARQ53H47 684 aaPredicted RBP20.63■□□□□ 0.89
CLN6-207ENST00000566347 ARTNQ5T4W7 220 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 C22orf39Q6P5X5 142 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 STRADAQ7RTN6 431 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 IQCHQ86VS3 1027 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 OR7D4Q8NG98 312 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 SPON2Q9BUD6 331 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 CEP44Q9C0F1 390 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 ERVMER34-1Q9H9K5 563 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 DYRK4Q9NR20 520 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 ARHGAP20Q9P2F6 1191 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 OR12D3Q9UGF7 316 aa20.63■□□□□ 0.89
CLN6-207ENST00000566347 LRRC10BA6NIK2 292 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 C2CD4BA6NLJ0 364 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 CBX4O00257 560 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 KPNA3O00505 521 aaPredicted RBP20.62■□□□□ 0.89
CLN6-207ENST00000566347 SMAD6O43541 496 aaKnown RBP20.62■□□□□ 0.89
CLN6-207ENST00000566347 MBD3O95983 291 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 CTSLP07711 333 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 MAT2AP31153 395 aaKnown RBP20.62■□□□□ 0.89
CLN6-207ENST00000566347 ADRA1BP35368 520 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 ETFBP38117 255 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 GNA12Q03113 381 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 UBXN1Q04323 297 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 CDO1Q16878 200 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 C15orf59Q2T9L4 293 aaPredicted RBP20.62■□□□□ 0.89
CLN6-207ENST00000566347 CCDC14Q49A88 953 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 PIP5KL1Q5T9C9 394 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 NEK5Q6P3R8 708 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 LINGO4Q6UY18 593 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 CCNI2Q6ZMN8 369 aaPredicted RBP20.62■□□□□ 0.89
CLN6-207ENST00000566347 PPP1R16AQ96I34 528 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 ERGIC2Q96RQ1 377 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 ATP13A1Q9HD20 1204 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 ADAM22Q9P0K1 906 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 FTSJ1Q9UET6 329 aa20.62■□□□□ 0.89
CLN6-207ENST00000566347 CXorf51AA0A1B0GTR3 108 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 PRAMEF26H0Y7S4 382 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 RNGTTO60942 597 aaKnown RBP20.61■□□□□ 0.89
CLN6-207ENST00000566347 CALB1P05937 261 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 ITGAVP06756 1048 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms