RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 NPLQ9BXD5 320 aaPredicted RBP4.84□□□□□ -1.63
CHD9-215ENST00000565442 CADM1Q9BY67 442 aaKnown RBP4.84□□□□□ -1.63
CHD9-215ENST00000565442 FRMD8Q9BZ67 464 aaPredicted RBP4.84□□□□□ -1.63
CHD9-215ENST00000565442 LMAN2LQ9H0V9 348 aa4.84□□□□□ -1.63
CHD9-215ENST00000565442 UNC45AQ9H3U1 944 aa4.84□□□□□ -1.63
CHD9-215ENST00000565442 TTC12Q9H892 705 aaPredicted RBP4.84□□□□□ -1.63
CHD9-215ENST00000565442 Q9N2J8 555 aa4.84□□□□□ -1.63
CHD9-215ENST00000565442 CYP46A1Q9Y6A2 500 aa4.84□□□□□ -1.63
CHD9-215ENST00000565442 TNPO2O14787 897 aaKnown RBP4.83□□□□□ -1.64
CHD9-215ENST00000565442 PPEF2O14830 753 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 UGDHO60701 494 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 USP12O75317 370 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 CBX6O95503 412 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 CD63P08962 238 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 FCGR2AP12318 317 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 GJC1P36383 396 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 ARHGAP25P42331 645 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 SLC12A2P55011 1212 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 CASP6P55212 293 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 GEMIN4P57678 1058 aaKnown RBP4.83□□□□□ -1.64
CHD9-215ENST00000565442 BAK1Q16611 211 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 FBXO43Q4G163 708 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 MEX3CQ5U5Q3 659 aaKnown RBP4.83□□□□□ -1.64
CHD9-215ENST00000565442 FAM171A1Q5VUB5 890 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 CNGA4Q8IV77 575 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 SAMD14Q8IZD0 417 aaPredicted RBP4.83□□□□□ -1.64
CHD9-215ENST00000565442 RFWD2Q8NHY2 731 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.83□□□□□ -1.64
CHD9-215ENST00000565442 SH3KBP1Q96B97 665 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 SKA1Q96BD8 255 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 CLSTN3Q9BQT9 956 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 FUZQ9BT04 418 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 QTRT1Q9BXR0 403 aaKnown RBP4.83□□□□□ -1.64
CHD9-215ENST00000565442 INTS2Q9H0H0 1204 aaKnown RBP4.83□□□□□ -1.64
CHD9-215ENST00000565442 ZHX3Q9H4I2 956 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 ZNF304Q9HCX3 659 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 IRAK4Q9NWZ3 460 aa4.83□□□□□ -1.64
CHD9-215ENST00000565442 SMIM35A0A1B0GVV1 85 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 PPP6CO00743 305 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 PER2O15055 1255 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 SPTLC2O15270 562 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 STRNO43815 780 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 HBP1O60381 514 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 TBX18O95935 607 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 TOP3BO95985 862 aaKnown RBP4.82□□□□□ -1.64
CHD9-215ENST00000565442 HLA-DQA2P01906 255 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 TUBB4AP04350 444 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 SNHG28P0DPA3 235 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 KLRC2P26717 231 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 STAT1P42224 750 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 PAFAH1B1P43034 410 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 CPA2P48052 419 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 CYP2J2P51589 502 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 CDH15P55291 814 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 HSF1Q00613 529 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 CFHR1Q03591 330 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 LMOD3Q0VAK6 560 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 CAMK1Q14012 370 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 SIM2Q14190 667 aaPredicted RBP4.82□□□□□ -1.64
CHD9-215ENST00000565442 SLC18A3Q16572 532 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 C5orf22Q49AR2 442 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 SLC9C1Q4G0N8 1177 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 FAM69AQ5T7M9 428 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 FAAH2Q6GMR7 532 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 FAM180BQ6P0A1 224 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 GJB7Q6PEY0 223 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 LRIG3Q6UXM1 1119 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 CYB5R4Q7L1T6 521 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 MON1AQ86VX9 555 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 GALNT16Q8N428 558 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 SETD9Q8NE22 299 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 CNOT9Q92600 299 aaKnown RBP4.82□□□□□ -1.64
CHD9-215ENST00000565442 MPHOSPH8Q99549 860 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 FAM118BQ9BPY3 351 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.82□□□□□ -1.64
CHD9-215ENST00000565442 SLC32A1Q9H598 525 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 EPHX3Q9H6B9 360 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 ELOVL5Q9NYP7 299 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 UTS2RQ9UKP6 389 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 DHDHQ9UQ10 334 aa4.82□□□□□ -1.64
CHD9-215ENST00000565442 TARSL2A2RTX5 802 aaKnown RBP4.81□□□□□ -1.64
CHD9-215ENST00000565442 DPPA5A6NC42 116 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 B4E171 279 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 PRR23D1E9PI22 279 aaPredicted RBP4.81□□□□□ -1.64
CHD9-215ENST00000565442 PRR23D2P0DMB1 279 aaPredicted RBP4.81□□□□□ -1.64
CHD9-215ENST00000565442 ATP5F1P24539 256 aaPredicted RBP4.81□□□□□ -1.64
CHD9-215ENST00000565442 CHRNA5P30532 468 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 CIITAP33076 1130 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 TSPAN7P41732 249 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 GPD2P43304 727 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 GHRHRQ02643 423 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 LAMB3Q13751 1172 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 ZNF260Q3ZCT1 412 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 NAA35Q5VZE5 725 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 AADACL2Q6P093 401 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 CHD1LQ86WJ1 897 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 CCDC25Q86WR0 208 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 GHDCQ8N2G8 530 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 RAB40AQ8WXH6 277 aa4.81□□□□□ -1.64
CHD9-215ENST00000565442 LBHD1Q9BQE6 289 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms